Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02796 ATGGTTTTCCCAACTCACAATTGTTTGCTAAATGCTTTCTTCATAGTATTTTGCATCATTTTTCTGGGTTTGACCTCTGCCAGGGACACTCTTAGATATTCTGAATCCATCAGAGACTCAGAGATAGTAACCTCAAACGACAGTGTCTTCATACTTGGTTTCTTCAGCCCTCAGAATTCAACGCACCGCTATGTAGGAATCTGGTATCTCTCTCACTCCAACGTTATATGGGTAGCTAATAGAGACCAACCACTCCTTGATTCTTCTGGGGTTTTGAAAATCTCCAAAGATGGTAACCTGGTTCTAGTTGATGGAGAAAACCAAGTTATTTGGTCGTCCAATGTGTCAAACACTGCAACAATGAATTCCACTGCTCAAATTTCCCATTATGGGAATCTAATGCTGAAAGATGACTCCACGGGACAGACCATATGGGAGAGTTTCGAGCATCCTTGTGATGCAGCAGTGCCAACCATGAAGATCAGTGCTAACAAAATCACAGGTGAGAAAATACAGTTTGTGTCAAGGAAAAGTGCTTCCGATCCTTCTACTGGCTATTTCTCCGCTTCTCTTGAACGTTTGCATACTCCAGAGGTGTTTATATGGATTAATGGAACTCGACCTTATTGGAGGACTGGTCCATGGAATGGTAGAATCTTCATTGGGACACCATTGATGTCAACTGGATATCTTTATGGATGGAGTGTAGGATATGAAGGAAATGATATTGTTTATCTAACTTACAGTTTTGCAGACCCATCTTCATTTGGAATCCTTACCCTGTCTCCAGAAGGAAAGCTTAAATTGGTAAGGTATTATAACAAAAAGCAAGGGTTGACTTTGGATCTGGGAATTTCTGATTGCGATGTTTATGGCACATGTGGGGCATTTGGAAGCTGTAACGGGCAGAGTTCACCAATATGTAGCTGTTTGAGTGGATATCAGCCCAGGAATCAAGAGGAGTGGAGAATGAAAAATTGGACTAGTGGGTGTGTGAGAAAGGTGCCACTAAATTGTGAGAGGTTAGACAATGGGAGTGAAGCTGTGCAAGAAGATATATTTTTGAAACTTGAAACAATGAAAGTACCAGATTTTGCGGAGAGATTAGATGTTGAGGAAGGCCAGTGTGGAACACAGTGCTTGAAGAATTGCTCTTGTTTGGCGTATGCATATGATGCTGGCATTGGGTGCTTGTATTGGACCAGAGACTTAATTGACTTGCAAAAGTTCCAAACTGCAGGCATTGATCTTTACATCCGTCTCGCCCATTCAGAATTTCAATCGAGTAATGCACAAGAGCATACTACTAAAAGAAGAGGCAAGGGATTAATCATCGAAATTACATTGGCAACTGCTGCAGCAATCATCTTGGCCATCTGTGCTTATCTAGCCATTCGTAGATTTCACTCGAGAAGTCAGAATCAAAGAGTGACTGCGGTGCAGAAATCAGCGAAACTGGATGAGCTACCGTTATTTGATTTTGAAGTCGTCGCAAATGCTACAAACAGTTTTCACTTAGCTAATACGCTTGGAAAGGGTGGTTTTGGTCCAGTTTACAAGGGACTATTGTCAGATGGTCAGGAAATTGCAGTGAAAAGACTCTCCAGAGCATCTGGACAAGGTGTGGAAGAATTTATGAATGAAGTGGTGGTGATTTCTAAACTTCAACATCGCAATCTTGTAAAACTTCTTGGCTGCTGCATTGAAGGAGACGAAAAGATGCTCATCTATGAATTCATGCCAAATAAAAGTTTGGATGCATTCATCTTTGATCCACTCCGGCGGAAACTTCTAGACTGGACAAAACGTTTTACTGTAGTTGAAGGAGTTGCTCGGGGCTTAATCTATCTCCACAGAGATTCTAGATTAAAAATTATACATAGAGATTTGAAGGCAAGCAATATCTTACTAGATGCAGATATGAATCCAAAAATATCAGACTTTGGTTTGGCTAGAATACATAAAGGGGAGGATGAAGTTAACACTAAGAGGGTTGTTGGCACATAG 2007 0.4106 MVFPTHNCLLNAFFIVFCIIFLGLTSARDTLRYSESIRDSEIVTSNDSVFILGFFSPQNSTHRYVGIWYLSHSNVIWVANRDQPLLDSSGVLKISKDGNLVLVDGENQVIWSSNVSNTATMNSTAQISHYGNLMLKDDSTGQTIWESFEHPCDAAVPTMKISANKITGEKIQFVSRKSASDPSTGYFSASLERLHTPEVFIWINGTRPYWRTGPWNGRIFIGTPLMSTGYLYGWSVGYEGNDIVYLTYSFADPSSFGILTLSPEGKLKLVRYYNKKQGLTLDLGISDCDVYGTCGAFGSCNGQSSPICSCLSGYQPRNQEEWRMKNWTSGCVRKVPLNCERLDNGSEAVQEDIFLKLETMKVPDFAERLDVEEGQCGTQCLKNCSCLAYAYDAGIGCLYWTRDLIDLQKFQTAGIDLYIRLAHSEFQSSNAQEHTTKRRGKGLIIEITLATAAAIILAICAYLAIRRFHSRSQNQRVTAVQKSAKLDELPLFDFEVVANATNSFHLANTLGKGGFGPVYKGLLSDGQEIAVKRLSRASGQGVEEFMNEVVVISKLQHRNLVKLLGCCIEGDEKMLIYEFMPNKSLDAFIFDPLRRKLLDWTKRFTVVEGVARGLIYLHRDSRLKIIHRDLKASNILLDADMNPKISDFGLARIHKGEDEVNTKRVVGT* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02796 668 Pfam PAN-like domain 349 407 IPR003609 -
Phac6g02796 668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 148 - -
Phac6g02796 668 SUPERFAMILY Protein kinase-like (PK-like) 485 668 IPR011009 -
Phac6g02796 668 Pfam Protein tyrosine and serine/threonine kinase 505 661 IPR001245 GO:0004672|GO:0006468
Phac6g02796 668 CDD PAN_AP_plant 335 422 - -
Phac6g02796 668 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 658 - -
Phac6g02796 668 Pfam D-mannose binding lectin 75 177 IPR001480 -
Phac6g02796 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Phac6g02796 668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 580 668 - -
Phac6g02796 668 Gene3D Transferase(Phosphotransferase) domain 1 580 668 - -
Phac6g02796 668 SMART serkin_6 504 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02796 668 Gene3D - 24 148 IPR036426 -
Phac6g02796 668 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Phac6g02796 668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 579 - -
Phac6g02796 668 SMART ntp_6 349 421 IPR003609 -
Phac6g02796 668 SMART blect_4 34 151 IPR001480 -
Phac6g02796 668 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Phac6g02796 668 CDD B_lectin 34 151 IPR001480 -
Phac6g02796 668 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Phac6g02796 668 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 217 IPR036426 -
Phac6g02796 668 Gene3D Phosphorylase Kinase; domain 1 463 579 - -
Phac6g02796 668 ProSiteProfiles Protein kinase domain profile. 504 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02796 Phac-Chr6 25117650 25121932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02796 430 668 Receptor kinase-like Gene Family AT4G23190 53.909 5.68e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac6g02796 PK_Tyr_Ser-Thr 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02796 - - gmx:112998788 1159.44