Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02786 ATGGATTTCTCAACTCTAACACTTGCTGTTATCCTAGGTTGCTACTTTTGTCACTGCTTGAGTACTGCCAATGATACCATCACATCTGGCCAATTCTTCAGAGATCCTCAAACTCTCATCTCAGCTAACGGAGTCTTCAAGTTGGGATTCTTCAGCCCTCAAAATTCATCATTTCGCTACCTGGGAATCTGGTATCTCTCTGACTCCAATGTCATATGGGTAGCTAACAGAAACCAGCCACTGACCAACAACTCTTCCGGGCTAGTTCAAATTTCTGTATATGGCAATCTTGTGGTGTTAGATAGCAACAAAAGGGTTGTTTGGTCATCAAATGTGACACACATTGCAACCAATTCAACCGCCAAACTTCTAGAAACAGGAAATCTCGTCCTGCTAGATAGTGTCACGGGACAAAGTATATGGGAGAGTTTCCAACATCCCAGTCACGCTCTCGTGCCAAGCATGAAATTTGGTACTAACAAAAGAACAGGTGAGAAAGTACGAATAACATCGTGGAGAAGTCCTTCTGATCCTTCTGTTGGGTACTATTCGACTACTCTTGAACACCCCAACACTCCAGAAATGTTTTTCTGGTTGAATGAAACGAAACCGTATCATCGTTCTGGTCCATGGAATAATCAGATTTTTATTGGCTCGCCCGAGATGTCACCTGGTTATCTAAATGGATGGAGTATGATGACTGACATAGAAGACGAAACTGTTTATCTTTCTTATAATTTGCCAAATCAATCTTACTTTGGAATCATGACCTTGAATCCACAGGGTCAAATTGTATGCTCATGGTGGAACAACGAAAAGTTAGTTCAGAAGATGGCGGTGCAGAGAACTGTCTGCGATCTTTATGGCTATTGTGGGGCATTTGCAACCTGTAATGTTCAGAGTTCACCAATATGCAGTTGTTTGAGAGGATATGGCCCCAAAAATTTAGAGGAGTGGAATAGAAAAAATTGGACTAGTGGGTGTGTAAGGAGTGAGCCACTGCATTGTGGGGAACACACTAATGCAAGTGAAGTTAGAAAAGATGTGTTTTTGAAGCTTGAGAATATGAAAGTGCCAGATTTTGTACATAGGTCAGATTCTTTGGAAGATGAATGCAAAGCAGAGTGTTTGAAGAATTGCTCTTGTGTGGCCTTCGCATATGACAGAGGCATTGGATGCATGGTTTGGAGTGGAGACTTGATTGACTTACAGAAGTTCTCAAGTGGAGGGGTTGATCTTTACATTCGCGAGCCACCTTCAGAAATCGAAAAACATTCAGATACAAGAAGAAAAAGGAGACTTATAATCCCAGTTGGAGTTGGAGTACCTATAGGAATGCTTATCTTGGCAGGCTGCCTTTATCTCTCATGGAAATGCACTGATAAATCCACAGGAAAAATATATTCCCAAAGGCAAGGAAGGAATCAGAAACAGGTAAAATTGGATGATGAGTTACCCCTTTTCAGTTTTGAAGAACTTGTAAATGCTACACACAATTTTCACTCGTCCAACGAGTTAGGTAAAGGAGGCTTTGGTTCAGTATATAAGGGACAACTGAAAGAAGGAGCCCAAATAGCAGTGAAAAGACTTTCAGAAACTTCTGGACAAGGACTAGAAGAATGCATGAATGAGGTATTAGTGATTTCAAAGCTTCAACATCGCAATCTTGTCAAACTTCTTGGCTGCTGTATTAAACAGGAGGAGAATATGTTGGTATACGAGTACATGCCTAACAAGAGTTTGGATGTAATATTATTTGATCCAGTAAAAAAGAAAGATCTAGATTGGCCAAAACGCTTCAATATAATTGAAGGAATCTCTCGAGGTTTGCTTTATCTCCATAGAGATTCTAGACTAAAAATTGTGCACAGGGATTTGAAAGTTAGTAACATCTTGTTGGATGAAGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCCAGAATTTTTGGAGGCAATGATATGCAGACCAATACTAGAAGGGTTGTTGGAACATTTGGTTATATCTCTCCAGAGTATGTATTCAGAGGGCTGGTTTCTGAGAAATTAGATGTCTTCAGCTTTGGAGTGTTGTTGCTAGAAATCATTAGTGGAAGAAAAATCAGCAGCTATTTCGGTTGTGACCAATCATTGAGTCTCTTGGGATTTGCTTGGAAATTATGGAATGAAAAGGACATCCAATCCCTGATAGATCCAGAAATATGTAATCCAAATAATGTAAATGACATAGTGAGATGCGTGCACATTGGACTTCTTTGTTTGCAAAATCTTGCAAAAGAAAGGCCAAGTATGGCTACTGTAGTTTCAATGCTGAATAGTGAGATTCTTAATCTTCCTTGCCCTTCACATCCTGCATTCGTGGAAAGGCAAATTGCATCGAGTGCAGAGTCATTTCAACAGAACAACACAACACACTCCATCAACAATGTTACTGTCACAGTCATGATGCAAGGTAGATAG 2460 0.4008 MDFSTLTLAVILGCYFCHCLSTANDTITSGQFFRDPQTLISANGVFKLGFFSPQNSSFRYLGIWYLSDSNVIWVANRNQPLTNNSSGLVQISVYGNLVVLDSNKRVVWSSNVTHIATNSTAKLLETGNLVLLDSVTGQSIWESFQHPSHALVPSMKFGTNKRTGEKVRITSWRSPSDPSVGYYSTTLEHPNTPEMFFWLNETKPYHRSGPWNNQIFIGSPEMSPGYLNGWSMMTDIEDETVYLSYNLPNQSYFGIMTLNPQGQIVCSWWNNEKLVQKMAVQRTVCDLYGYCGAFATCNVQSSPICSCLRGYGPKNLEEWNRKNWTSGCVRSEPLHCGEHTNASEVRKDVFLKLENMKVPDFVHRSDSLEDECKAECLKNCSCVAFAYDRGIGCMVWSGDLIDLQKFSSGGVDLYIREPPSEIEKHSDTRRKRRLIIPVGVGVPIGMLILAGCLYLSWKCTDKSTGKIYSQRQGRNQKQVKLDDELPLFSFEELVNATHNFHSSNELGKGGFGSVYKGQLKEGAQIAVKRLSETSGQGLEECMNEVLVISKLQHRNLVKLLGCCIKQEENMLVYEYMPNKSLDVILFDPVKKKDLDWPKRFNIIEGISRGLLYLHRDSRLKIVHRDLKVSNILLDEELNPKISDFGMARIFGGNDMQTNTRRVVGTFGYISPEYVFRGLVSEKLDVFSFGVLLLEIISGRKISSYFGCDQSLSLLGFAWKLWNEKDIQSLIDPEICNPNNVNDIVRCVHIGLLCLQNLAKERPSMATVVSMLNSEILNLPCPSHPAFVERQIASSAESFQQNNTTHSINNVTVTVMMQGR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02786 819 SMART serkin_6 500 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02786 819 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Phac6g02786 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 763 - -
Phac6g02786 819 CDD B_lectin 37 147 IPR001480 -
Phac6g02786 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Phac6g02786 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 213 IPR036426 -
Phac6g02786 819 Pfam D-mannose binding lectin 71 173 IPR001480 -
Phac6g02786 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 575 - -
Phac6g02786 819 SUPERFAMILY Protein kinase-like (PK-like) 483 797 IPR011009 -
Phac6g02786 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 781 - -
Phac6g02786 819 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Phac6g02786 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Phac6g02786 819 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Phac6g02786 819 CDD STKc_IRAK 506 772 - -
Phac6g02786 819 SMART blect_4 30 147 IPR001480 -
Phac6g02786 819 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Phac6g02786 819 CDD PAN_AP_plant 333 418 - -
Phac6g02786 819 Gene3D Phosphorylase Kinase; domain 1 461 575 - -
Phac6g02786 819 Pfam PAN-like domain 346 403 IPR003609 -
Phac6g02786 819 Gene3D - 19 145 IPR036426 -
Phac6g02786 819 Gene3D Transferase(Phosphotransferase) domain 1 576 777 - -
Phac6g02786 819 SMART ntp_6 345 417 IPR003609 -
Phac6g02786 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 144 - -
Phac6g02786 819 Pfam Protein tyrosine and serine/threonine kinase 502 771 IPR001245 GO:0004672|GO:0006468
Phac6g02786 819 ProSiteProfiles Protein kinase domain profile. 500 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02786 Phac-Chr6 25098735 25102827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02786 415 796 Receptor kinase-like Gene Family AT4G05200 47.273 8.21e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac6g02786 PK_Tyr_Ser-Thr 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02786 - - gmx:106794168 1384.39