Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02782 ATGAGGAAGTGTGATCTCTGTAACAGTCCTGCAAAGTTGTCCTGTGAATCAGATCAAGCCAGCCTCTGTTGGAAATGCGATGCTAAGGTTCACAGTGCAAACTTCCTCGTCACCAAACATCCCAGGATTCTTCTCTGCCACGTTTGTCAGTCGCTAACGGCTTGGCAAGGAACTGGACCCAAGTTTGTACCCACCATCTCAATTTGCAACACCTGTGTTAACAACAACAGTGGTAGCAGCAGCCGACAGATTCATGATGAAGATGGTGATGACAATGATGATGGTGTGATGGAGGATCATGTAGAAAACGATGAGGGTGGTGTGGAAGAAGATGATGAAGAAAATCAAGTGGTTCCATGGACATCTACACCACCGCCCCCAGCTTCCACTTCTTCAAATAGTGTTGCAACTGCTTCTACCAGCTCCTCTAATGTTGAAGAGGGTACCTCGGATTAA 456 0.4671 MRKCDLCNSPAKLSCESDQASLCWKCDAKVHSANFLVTKHPRILLCHVCQSLTAWQGTGPKFVPTISICNTCVNNNSGSSSRQIHDEDGDDNDDGVMEDHVENDEGGVEEDDEENQVVPWTSTPPPPASTSSNSVATASTSSSNVEEGTSD* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02782 151 CDD Bbox1_BBX-like 3 45 - -
Phac6g02782 151 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 144 - -
Phac6g02782 151 MobiDBLite consensus disorder prediction 76 151 - -
Phac6g02782 151 MobiDBLite consensus disorder prediction 127 151 - -
Phac6g02782 151 SMART bboxneu5 1 45 IPR000315 GO:0008270
Phac6g02782 151 MobiDBLite consensus disorder prediction 90 116 - -
Phac6g02782 151 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02782 Phac-Chr6 25081022 25082374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02782 2 100 C2C2-CO-like Transcription Factor Family AT4G27310 50.459 1.31e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac6g02782 zf-B_box 2.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02782 - - vum:124826682 199.519