Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02778 ATGGGGTTTGATCTTGAAGACCCACTAGTCAGCTTGGAAGAAGACCAAACCTTTAATGTCTCAGATCTCTTTGCCTCCGAATCAGATCACATGCCCTCACCAAACTACTCAAGTATAACACATTTTTATGTTTTCTGCTGTGAGGCCATATCTCTTATTCTTCAGGTTCAGCTTTCTTACAAATTGGACCCTTTTGTAGCTTATCTTGCTATAAATTACATGCACCGTTTCATGTCAAGCCAGGAAATTCCGAGTTTGCAGAAGGGGAAGCCGTGGTATCTTAGGCTTGTTGTGGTATCATGTCTTTCTCTTGCTTCAAAGATGAAAAACACAACTTTACCATTTTTGGAAATGCAGAAAGAAGGTTGCAACTTTAAGGCTCAAAGTATTCAGAAAATGGAGCCTCTGATTCTCGGGGCACTGAAATGGCGTATGAGGTCAATTACACCTTTTTCTTTCCTGCACTTCTTCGTCTCTTTAGCTGAAATCGAAGACCAATCACTGAAGCAAGCACTCAAAGAGAGAGCTTCAGTGATAATCTTCAATGCACAAAATGACATTAAGCTTTTAGAGTTTAAACCTTCAACTATTGCAGCAACTGCCCTTATCATTGCTTCTCACGAACTGCTGCCACATCAATATTCTATTCTGAGAGCTTCAATTATATCCAGTGAGTACCTAGACGAGGAGACATTGTCCAAGTGCTTTGATTTGATGCAAGAGATGATGATAAGAATGGTAGCAAAGGAGTTAATGACAGATAGAAGGTTTTTAAGAACAGAAACTCCGGTGAGTGTGGTGGAGAGAAACACCAAACGACAAAGGATTTAA 831 0.4007 MGFDLEDPLVSLEEDQTFNVSDLFASESDHMPSPNYSSITHFYVFCCEAISLILQVQLSYKLDPFVAYLAINYMHRFMSSQEIPSLQKGKPWYLRLVVVSCLSLASKMKNTTLPFLEMQKEGCNFKAQSIQKMEPLILGALKWRMRSITPFSFLHFFVSLAEIEDQSLKQALKERASVIIFNAQNDIKLLEFKPSTIAATALIIASHELLPHQYSILRASIISSEYLDEETLSKCFDLMQEMMIRMVAKELMTDRRFLRTETPVSVVERNTKRQRI* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02778 276 PANTHER CYCLINS 50 244 IPR039361 -
Phac6g02778 276 Gene3D - 23 237 - -
Phac6g02778 276 SMART Cyclin_C_2 148 264 IPR004367 -
Phac6g02778 276 SMART cyclin_7 51 139 IPR013763 -
Phac6g02778 276 SMART cyclin_7 155 241 IPR013763 -
Phac6g02778 276 FunFam D6-type cyclin 144 237 - -
Phac6g02778 276 SUPERFAMILY Cyclin-like 20 145 IPR036915 -
Phac6g02778 276 Gene3D - 33 146 - -
Phac6g02778 276 Pfam Cyclin, N-terminal domain 48 145 IPR006671 -
Phac6g02778 276 FunFam D6-type cyclin 35 143 - -
Phac6g02778 276 CDD CYCLIN_AtCycD-like_rpt2 148 239 - -
Phac6g02778 276 SUPERFAMILY Cyclin-like 129 250 IPR036915 -
Phac6g02778 276 Pfam Cyclin, C-terminal domain 148 246 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02778 Phac-Chr6 25064858 25066249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02778 1 269 Core Cell Cycle Gene Families AT4G03270 39.437 1.50e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02778 K18812 - gmx:100799985 434.876