Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02773 ATGAGGTTAAGATGGCATGTCCAGTTTGCCGAGGAACTTGTACATGTAAAGATTGCTTGGCACGTCAACATGAAGACAGTGAAAGAACATTTGGCTGGTAAAAACAGAGTTGATAGGATATTGCATTTTCATTATTTGGTATGTATGCTCCTTCCTGTACTGAAACAAATAAAAGAAGACTACCACGTGGGTGTAGAAACAAAAGCGAAAATTAAAGGAAAAAGAATTAATGACATTATCATCAAACCAGTCAAGTTTGGCTGCAATGAGAAAAATTACTGCAATCACTGCAAAACACCCATTTTGGATCTTCATAAAAGCTGCCTTAGTTGCTCATACAGTCTTTGCTTAAGTTGTTCTCACGCATTAAGTCAAGGAAGAATCTCTGAACAAAACAACTATTCTATATCCAAGCTACCTGACAGAATAAGTGCTTGCATTTCTAGCAAAAGATACCTATTGGATGATAAGGCCATTTCTAATGGCAATTTAACTGATACCTCAATGTTAACAGAGTGGACAAGTTGTAATGGTGCTGCCATGGTATCATGCCCACCTACAAAGCTTGATGATTGTGGTAATAGCCACCTTGATCTGAACTATGTTTTTCCCTTAAGTTGGATCAAAGAAATGGAAGCAAATGCAGAAGAAATAGTTTGCAGCTATGACTTTCCTGAAACTTTGGATAAAAGTTCAAGTTGCCCAATGTGCGTTGACAAAGATCATAAAACTAGCAGATACAAGCAGCTACCGGAAGCGGCTCAAAGGGAAGATTCTAATGATAATTATTTGTTTTATCCTACAGTTTTTGACATCGACAGCAATCATTTTGAACACTTTCAGAAACACTGGGGAAGAGGCCATCCTGTAGTAGTGAGAGATGTGCTGCAAAGTACACCAAACCTTAGTTGGGATCCACTGTTCATGTTCTGCACTTATCTTGAGAGGAGCATGACAAGATATGAGAATAATAAGGACTTACTTGAAGCTTGTTTGGATTGGTTTGAGGTGGAGACTAACGTTAGGCAGTATTTTACTGGGTCTCTTAAATGTCAACCAAAGAAAAATACTTGGCATGAGATGCTGAAACTTAAAGGGTGGTTGTCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAACTAATTGATGCTCTTCCAATTCAAGAATACATGAATCCTTTGTCAGGTCTTCTGAATTTAGCTGCAAATTTGCCACAGGGGAGTACAAAACATGAGATAGGACCATATCTTTATATTTCATATGGCTGTGCTGATGATGAAGCTGATTCCGTGACAAATCTCTGTTATGACTCATATGACATGGTTAATGTTATGGCACATTCCATGGACATCCCTCTGTCCACTGATCAGCTATCTAGAATAAGCAAGTTACTGAAAAAACACAAAGTTCTATGTCAAAGGGTGTCATCTAAAACTACTGCTGAGCATGCAGAAGACAGGGAACAAAATGAAATGCAAAGTTTGGTAAGAGAAGGAACTGACTTTTTAAGGAGAGTCAATAGAACTTCTTGCATCTCTAGTGAAGCCAAAACAATATGCAATCAGAATTTAGACACCAATATTTCCGGTGATGAAGAATGTGGTTCTTATTCTGAAACTGAAAAGGCACAACGCTCTTTACCTTTCCACAGCATAGTTCTAAGCACTGAAATGTCTCCAGATCATAATCCTAGAAATTCCTTTGAAAACTCAGACAATGTTAAAAGGAAGAAGGCTACAGCGAATGCTGGGGCTCAATGGGATGTCTTTCGAAGGCAAGATGTGCCAAAGCTCTTAGAATACCTTAAAAGACACTCTGATGAATTTTCACATGCTAGTGAACATCACGAGAAGATGATTCATCCACTTCTTGATCAGAGCTTCTTTCTTGACAATACTCACAAGATGAGACTTAAGGAGGAATTTAAAATTGAACCATGGACTTTTGAGCAACATGTTGGAGAAGCTGTCATCATTCCTTGTGGATGTCCATACCAGATTAGGAATCCTAAGTGTTGTGTTCATGTGGAATTGGAATTTGTATCCCCTGAGAATGTTGCTGAGTGTATCCAATTGGTTGATGAGGTCCGGCTGCTTCCAGAAGATCACCCCGCAAAAGTAGAAAAACTGGAGGTGAAAAAAATGGCCCTTCATAGCATGAGTACAGCAATAAAGGAAATACGTGAGCTTACATGCAGAACATGA 2214 0.3875 MRLRWHVQFAEELVHVKIAWHVNMKTVKEHLAGKNRVDRILHFHYLVCMLLPVLKQIKEDYHVGVETKAKIKGKRINDIIIKPVKFGCNEKNYCNHCKTPILDLHKSCLSCSYSLCLSCSHALSQGRISEQNNYSISKLPDRISACISSKRYLLDDKAISNGNLTDTSMLTEWTSCNGAAMVSCPPTKLDDCGNSHLDLNYVFPLSWIKEMEANAEEIVCSYDFPETLDKSSSCPMCVDKDHKTSRYKQLPEAAQREDSNDNYLFYPTVFDIDSNHFEHFQKHWGRGHPVVVRDVLQSTPNLSWDPLFMFCTYLERSMTRYENNKDLLEACLDWFEVETNVRQYFTGSLKCQPKKNTWHEMLKLKGWLSSQLFKEQFPAHFAELIDALPIQEYMNPLSGLLNLAANLPQGSTKHEIGPYLYISYGCADDEADSVTNLCYDSYDMVNVMAHSMDIPLSTDQLSRISKLLKKHKVLCQRVSSKTTAEHAEDREQNEMQSLVREGTDFLRRVNRTSCISSEAKTICNQNLDTNISGDEECGSYSETEKAQRSLPFHSIVLSTEMSPDHNPRNSFENSDNVKRKKATANAGAQWDVFRRQDVPKLLEYLKRHSDEFSHASEHHEKMIHPLLDQSFFLDNTHKMRLKEEFKIEPWTFEQHVGEAVIIPCGCPYQIRNPKCCVHVELEFVSPENVAECIQLVDEVRLLPEDHPAKVEKLEVKKMALHSMSTAIKEIRELTCRT* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02773 737 ProSiteProfiles JmjC domain profile. 396 700 IPR003347 -
Phac6g02773 737 SUPERFAMILY Clavaminate synthase-like 276 725 - -
Phac6g02773 737 SMART cupin_9 377 700 IPR003347 -
Phac6g02773 737 MobiDBLite consensus disorder prediction 559 582 - -
Phac6g02773 737 Gene3D Cupin 268 708 - -
Phac6g02773 737 Pfam JmjC domain, hydroxylase 588 683 IPR003347 -
Phac6g02773 737 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 34 735 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02773 Phac-Chr6 25032954 25039505 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac6g02773 JmjC 2e-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02773 K15601 - gmx:100802129 1252.27