Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02771 ATGGGGGGGAAATCGACGCCGGCGGAGGAAGGAGAAGCGGTACCAGAGCATCTACGGTGCAACCGGACGGACGGGAGGCAATGGCGGTGCCGGCGGCGAGTGATGGAAAACCTAAAGCTCTGCGAGATTCACTACCTGCAAGGTCGGCATCGGCAGAACAAGGAGACGGTTCCGGAGTCGCTGAAGCTTCAGAGAAAGAGGCAAAACGATGCCGTTGAGACTAAGATTGGGGCGAAGCGGAAGCGCAAATCGAGAGAAGCATTGGTCAATAGGAGGAACCAATTGGAGCTCATAAGGATGGTTCTGCAGAGAGAGGTTGAGAAGAAGAAGAAGAAGGAATCGCAATTGAATTTGCCTTTGAATTTGAATTTGCACTCCAATCACGAGTTGAGGAAGGAGTTGCCAAACGGGGTTATGGCTATCGCTTCCGCTTCGACGCCCAATGTGGCTTCTTGTTCTCGTTACTTCAGGTCCAAGAATGTTGAGAGGGGTTCTGTTTTGCAGTGTGGACGAAACTTGAAGAAGGGGAGGAGGAAGAAGTGTCATTGGTGTCAGAGAAGTGATTCCTGCACTCTTATAAGGTGCTCAAACTGCCAGAGAGAGTTTTTCTGCATGGATTGCATTAAACAAAGGTATTTTGACACTCAAAATGAGGTTAAGATGGCATGTCCAGTTTGCCGAGGAACTTGTACATGTAAAGATTGCTTGGCACGTCAACATGAAGACAGTGAAAGTAAGGAACATTTGGCTGGTAAAAACAGAGTTGATAGGATATTGCATTTTCATTATTTGGTATGTATGCTCCTTCCTGTACTGAAACAAATAAAAGAAGACTACCACGTGGGTGTAGAAACAAAAGCGAAAATTAAAGGAAAAAGAATTAATGACATTATCATCAAACCAGTCAAGTTTGGCTGCAATGAGAAAAATTACTGCAATCACTGCAAAACACCCATTTTGGATCTTCATAAAAGCTGCCTTAGTTGCTCATACAGTCTTTGCTTAAGTTGTTCTCACGCATTAAGTCAAGGAAGAATCTCTGAACAAAACAACTATTCTATATCCAAGCTACCTGACAGAATAAGTGCTTGCATTTCTAGCAAAAGATACCTATTGGATGATAAGGCCATTTCTAATGGCAATTTAACTGATACCTCAATGTTAACAGAGTGGACAAGTTGTAATGGTGCTGCCATGGTATCATGCCCACCTACAAAGCTTGATGATTGTGGTAATAGCCACCTTGATCTGAACTATGTTTTTCCCTTAAGTTGGATCAAAGAAATGGAAGCAAATGCAGAAGAAATAGTTTGCAGCTATGACTTTCCTGAAACTTTGGATAAAAGTTCAAGTTGCCCAATGTGCGTTGACAAAGATCATAAAACTAGCAGATACAAGCAGCTACCGGAAGCGGCTCAAAGGGAAGATTCTAATGATAATTATTTGTTTTATCCTACAGTTTTTGACATCGACAGCAATCATTTTGAACACTTTCAGAAACACTGGGGAAGAGGCCATCCTGTAGTAGTGAGAGATGTGCTGCAAAGTACACCAAACCTTAGTTGGGATCCACTGTTCATGTTCTGCACTTATCTTGAGAGGAGCATGACAAGATATGAGAATAATAAGGACTTACTTGAAGCTTGTTTGGATTGGTTTGAGGTGGAGACTAACGTTAGGCAGTATTTTACTGGGTCTCTTAAATGTCAACCAAAGAAAAATACTTGGCATGAGATGCTGAAACTTAAAGGGTGGTTGTCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAACTAATTGATGCTCTTCCAATTCAAGAATACATGAATCCTTTGTCAGGTCTTCTGAATTTAGCTGCAAATTTGCCACAGGGGAGTACAAAACATGAGATAGGACCATATCTTTATATTTCATATGGCTGTGCTGATGATGAAGCTGATTCCGTGACAAATCTCTGTTATGACTCATATGACATGGTTAATGTTATGGCACATTCCATGGACATCCCTCTGTCCACTGATCAGCTATCTAGAATAAGCAAGTTACTGAAAAAACACAAAGTTCTATGTCAAAGGGTGTCATCTAAAACTACTGCTGAGCATGCAGAAGACAGGGAACAAAATGAAATGCAAAGTTTGGTAAGAGAAGGAACTGACTTTTTAAGGAGAGTCAATAGAACTTCTTGCATCTCTAGTGAAGCCAAAACAATATGCAATCAGAATTTAGACACCAATATTTCCGGTGATGAAGAATGTGGTTCTTATTCTGAAACTGAAAAGGCACAACGCTCTTTACCTTTCCACAGCATAGTTCTAAGCACTGAAATGTCTCCAGATCATAATCCTAGAAATTCCTTTGAAAACTCAGACAATGTTAAAAGGAAGAAGGCTACAGCGAATGCTGGGGCTCAATGGGATGTCTTTCGAAGGCAAGATGTGCCAAAGCTCTTAGAATACCTTAAAAGACACTCTGATGAATTTTCACATGCTAGTGAACATCACGAGAAGATGATTCATCCACTTCTTGATCAGAGCTTCTTTCTTGACAATACTCACAAGATGAGACTTAAGGAGGAATTTATGTTGTGTTCATGTGGAATTGGAATTTGTATCCCCTGA 2628 0.4117 MGGKSTPAEEGEAVPEHLRCNRTDGRQWRCRRRVMENLKLCEIHYLQGRHRQNKETVPESLKLQRKRQNDAVETKIGAKRKRKSREALVNRRNQLELIRMVLQREVEKKKKKESQLNLPLNLNLHSNHELRKELPNGVMAIASASTPNVASCSRYFRSKNVERGSVLQCGRNLKKGRRKKCHWCQRSDSCTLIRCSNCQREFFCMDCIKQRYFDTQNEVKMACPVCRGTCTCKDCLARQHEDSESKEHLAGKNRVDRILHFHYLVCMLLPVLKQIKEDYHVGVETKAKIKGKRINDIIIKPVKFGCNEKNYCNHCKTPILDLHKSCLSCSYSLCLSCSHALSQGRISEQNNYSISKLPDRISACISSKRYLLDDKAISNGNLTDTSMLTEWTSCNGAAMVSCPPTKLDDCGNSHLDLNYVFPLSWIKEMEANAEEIVCSYDFPETLDKSSSCPMCVDKDHKTSRYKQLPEAAQREDSNDNYLFYPTVFDIDSNHFEHFQKHWGRGHPVVVRDVLQSTPNLSWDPLFMFCTYLERSMTRYENNKDLLEACLDWFEVETNVRQYFTGSLKCQPKKNTWHEMLKLKGWLSSQLFKEQFPAHFAELIDALPIQEYMNPLSGLLNLAANLPQGSTKHEIGPYLYISYGCADDEADSVTNLCYDSYDMVNVMAHSMDIPLSTDQLSRISKLLKKHKVLCQRVSSKTTAEHAEDREQNEMQSLVREGTDFLRRVNRTSCISSEAKTICNQNLDTNISGDEECGSYSETEKAQRSLPFHSIVLSTEMSPDHNPRNSFENSDNVKRKKATANAGAQWDVFRRQDVPKLLEYLKRHSDEFSHASEHHEKMIHPLLDQSFFLDNTHKMRLKEEFMLCSCGIGICIP* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02771 875 SMART cupin_9 595 873 IPR003347 -
Phac6g02771 875 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 863 IPR045109 GO:0032454|GO:0033169
Phac6g02771 875 Pfam WRC 15 55 IPR014977 -
Phac6g02771 875 ProSiteProfiles Zinc finger RING-type profile. 181 227 IPR001841 -
Phac6g02771 875 SUPERFAMILY Clavaminate synthase-like 494 860 - -
Phac6g02771 875 Gene3D Cupin 487 871 - -
Phac6g02771 875 ProSiteProfiles WRC domain profile. 14 58 IPR014977 -
Phac6g02771 875 MobiDBLite consensus disorder prediction 777 801 - -
Phac6g02771 875 Coils Coil 85 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02771 Phac-Chr6 25032954 25039505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02771 11 54 GRF Transcription Factor Family AT2G22840 50.000 3.81e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02771 K15601 - gmx:100802129 1459.89