Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02770 ATGGGGGGGAAATCGACGCCGGCGGAGGAAGGAGAAGCGGTACCAGAGCATCTACGGTGCAACCGGACGGACGGGAGGCAATGGCGGTGCCGGCGGCGAGTGATGGAAAACCTAAAGCTCTGCGAGATTCACTACCTGCAAGGTCGGCATCGGCAGAACAAGGAGACGGTTCCGGAGTCGCTGAAGCTTCAGAGAAAGAGGCAAAACGATGCCGTTGAGACTAAGATTGGGGCGAAGCGGAAGCGCAAATCGAGAGAAGCATTGGTCAATAGGAGGAACCAATTGGAGCTCATAAGGATGGTTCTGCAGAGAGAGGTTGAGAAGAAGAAGAAGAAGGAATCGCAATTGAATTTGCCTTTGAATTTGAATTTGCACTCCAATCACGAGTTGAGGAAGGAGTTGCCAAACGGGGTTATGGCTATCGCTTCCGCTTCGACGCCCAATGTGGCTTCTTGTTCTCGTTACTTCAGGTCCAAGAATGTTGAGAGGGGTTCTGTTGCCAAGTTGCAGGTTTTGCAGTGTGGACGAAACTTGAAGAAGGGGAGGAGGAAGAAGTGTCATTGGTGTCAGAGAAGTGATTCCTGCACTCTTATAAGGTGCTCAAACTGCCAGAGAGAGTTTTTCTGCATGGATTGCATTAAACAAAGGTATTTTGACACTCAAAATGAGGTTAAGATGGCATGTCCAGTTTGCCGAGGAACTTGTACATGTAAAGATTGCTTGGCACGTCAACATGAAGACAGTGAAAGTAAGGAACATTTGGCTGGTAAAAACAGAGTTGATAGGATATTGCATTTTCATTATTTGGTATGTATGCTCCTTCCTGTACTGAAACAAATAAAAGAAGACTACCACGTGGGTGTAGAAACAAAAGCGAAAATTAAAGGAAAAAGAATTAATGACATTATCATCAAACCAGTCAAGTTTGGCTGCAATGAGAAAAATTACTGCAATCACTGCAAAACACCCATTTTGGATCTTCATAAAAGCTGCCTTAGTTGCTCATACAGTCTTTGCTTAAGTTGTTCTCACGCATTAAGTCAAGGAAGAATCTCTGAACAAAACAACTATTCTATATCCAAGCTACCTGACAGAATAAGTGCTTGCATTTCTAGCAAAAGATACCTATTGGATGATAAGGCCATTTCTAATGGCAATTTAACTGATACCTCAATGTTAACAGAGTGGACAAGTTGTAATGGTGCTGCCATGGTATCATGCCCACCTACAAAGCTTGATGATTGTGGTAATAGCCACCTTGATCTGAACTATGTTTTTCCCTTAAGTTGGATCAAAGAAATGGAAGCAAATGCAGAAGAAATAGTTTGCAGCTATGACTTTCCTGAAACTTTGGATAAAAGTTCAAGTTGCCCAATGTGCGTTGACAAAGATCATAAAACTAGCAGATACAAGCAGCTACCGGAAGCGGCTCAAAGGGAAGATTCTAATGATAATTATTTGTTTTATCCTACAGTTTTTGACATCGACAGCAATCATTTTGAACACTTTCAGAAACACTGGGGAAGAGGCCATCCTGTAGTAGTGAGAGATGTGCTGCAAAGTACACCAAACCTTAGTTGGGATCCACTGTTCATGTTCTGCACTTATCTTGAGAGGAGCATGACAAGATATGAGAATAATAAGGACTTACTTGAAGCTTGTTTGGATTGGTTTGAGGTGGAGACTAACGTTAGGCAGTATTTTACTGGGTCTCTTAAATGTCAACCAAAGAAAAATACTTGGCATGAGATGCTGAAACTTAAAGGGTGGTTGTCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAACTAATTGATGCTCTTCCAATTCAAGAATACATGAATCCTTTGTCAGGTCTTCTGAATTTAGCTGCAAATTTGCCACAGGGGAGTACAAAACATGAGATAGGACCATATCTTTATATTTCATATGGCTGTGCTGATGATGAAGCTGATTCCGTGACAAATCTCTGTTATGACTCATATGACATGGTTAATGTTATGGCACATTCCATGGACATCCCTCTGTCCACTGATCAGCTATCTAGAATAAGCAAGTTACTGAAAAAACACAAAGTTCTATGTCAAAGGGTGTCATCTAAAACTACTGCTGAGCATGCAGAAGACAGGGAACAAAATGAAATGCAAAGTTTGGTAAGAGAAGGAACTGACTTTTTAAGGAGAGTCAATAGAACTTCTTGCATCTCTAGTGAAGCCAAAACAATATGCAATCAGAATTTAGACACCAATATTTCCGGTGATGAAGAATGTGGTTCTTATTCTGAAACTGAAAAGGCACAACGCTCTTTACCTTTCCACAGCATAGTTCTAAGCACTGAAATGTCTCCAGATCATAATCCTAGAAATTCCTTTGAAAACTCAGACAATGTTAAAAGGAAGAAGGCTACAGCGAATGCTGGGGCTCAATGGGATGTCTTTCGAAGGCAAGATGTGCCAAAGCTCTTAGAATACCTTAAAAGACACTCTGATGAATTTTCACATGCTAGTGAACATCACGAGAAGATGATTCATCCACTTCTTGATCAGAGCTTCTTTCTTGACAATACTCACAAGATGAGACTTAAGGAGGAATTTAAAATTGAACCATGGACTTTTGAGCAACATGTTGGAGAAGCTGTCATCATTCCTTGTGGATGTCCATACCAGATTAGGAATCCTAAGTGTTGTGTTCATGTGGAATTGGAATTTGTATCCCCTGAGAATGTTGCTGAGTGTATCCAATTGGTTGATGAGGTCCGGCTGCTTCCAGAAGATCACCCCGCAAAAGTAGAAAAACTGGAGGTGAAAAAAATGGCCCTTCATAGCATGAGTACAGCAATAAAGGAAATACGTGAGCTTACATGCAGAACATGA 2883 0.4135 MGGKSTPAEEGEAVPEHLRCNRTDGRQWRCRRRVMENLKLCEIHYLQGRHRQNKETVPESLKLQRKRQNDAVETKIGAKRKRKSREALVNRRNQLELIRMVLQREVEKKKKKESQLNLPLNLNLHSNHELRKELPNGVMAIASASTPNVASCSRYFRSKNVERGSVAKLQVLQCGRNLKKGRRKKCHWCQRSDSCTLIRCSNCQREFFCMDCIKQRYFDTQNEVKMACPVCRGTCTCKDCLARQHEDSESKEHLAGKNRVDRILHFHYLVCMLLPVLKQIKEDYHVGVETKAKIKGKRINDIIIKPVKFGCNEKNYCNHCKTPILDLHKSCLSCSYSLCLSCSHALSQGRISEQNNYSISKLPDRISACISSKRYLLDDKAISNGNLTDTSMLTEWTSCNGAAMVSCPPTKLDDCGNSHLDLNYVFPLSWIKEMEANAEEIVCSYDFPETLDKSSSCPMCVDKDHKTSRYKQLPEAAQREDSNDNYLFYPTVFDIDSNHFEHFQKHWGRGHPVVVRDVLQSTPNLSWDPLFMFCTYLERSMTRYENNKDLLEACLDWFEVETNVRQYFTGSLKCQPKKNTWHEMLKLKGWLSSQLFKEQFPAHFAELIDALPIQEYMNPLSGLLNLAANLPQGSTKHEIGPYLYISYGCADDEADSVTNLCYDSYDMVNVMAHSMDIPLSTDQLSRISKLLKKHKVLCQRVSSKTTAEHAEDREQNEMQSLVREGTDFLRRVNRTSCISSEAKTICNQNLDTNISGDEECGSYSETEKAQRSLPFHSIVLSTEMSPDHNPRNSFENSDNVKRKKATANAGAQWDVFRRQDVPKLLEYLKRHSDEFSHASEHHEKMIHPLLDQSFFLDNTHKMRLKEEFKIEPWTFEQHVGEAVIIPCGCPYQIRNPKCCVHVELEFVSPENVAECIQLVDEVRLLPEDHPAKVEKLEVKKMALHSMSTAIKEIRELTCRT* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02770 960 MobiDBLite consensus disorder prediction 782 806 - -
Phac6g02770 960 Pfam WRC 15 55 IPR014977 -
Phac6g02770 960 SMART cupin_9 600 923 IPR003347 -
Phac6g02770 960 Pfam JmjC domain, hydroxylase 811 906 IPR003347 -
Phac6g02770 960 Gene3D Cupin 492 931 - -
Phac6g02770 960 ProSiteProfiles JmjC domain profile. 619 923 IPR003347 -
Phac6g02770 960 ProSiteProfiles Zinc finger RING-type profile. 186 232 IPR001841 -
Phac6g02770 960 SUPERFAMILY Clavaminate synthase-like 499 948 - -
Phac6g02770 960 ProSiteProfiles WRC domain profile. 14 58 IPR014977 -
Phac6g02770 960 Coils Coil 85 112 - -
Phac6g02770 960 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 958 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02770 Phac-Chr6 25032954 25039505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02770 11 54 GRF Transcription Factor Family AT2G22840 50.000 4.32e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac6g02770 JmjC 2.9e-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02770 K15601 - gmx:100802129 1647.1