Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02743 ATGGAACAGTTTTGGCATAGTAATTCTATTCTGTTATCTGTTTCTCAGCCTTCTAACCTGCCGTGGCCACAATCTTTTTCCCTTCAAAATCGTTTATCGGATAGACTTAGAGATCTATCTGCTAAAGGTTGGAATCAGTTGGCTGGATCAGGTCCTGTACCCTGGAAGCAAGCGCCCAGTCTGTTCAATTCTGCTTCTTCATCCGACCTTATTTCAGATGTTCCTTCTTTAGCTGAATTATCCAGTAGCTTTGACAAAATGTATTGCAATGAAAGGTTACCTGCCTCAGCCTTGGAAAAGAAAAGTGAGGATTTTCCTGGATTACCAGTTCATTGGAATGTCACCATTTGCCCACGAGATATGAAGCATATGAATGGAATGAGGAATGAGGACAAAGCAAGTTCATGTTTAAATATGTGTCAGCAGCCTTCTTCTATGAAGGAAGAGTCATCTCCTCAACCATTTGGTTTGCCTGTACCTAGTTCATGCCAAAATGAAAGAAATGGTCAACTTGGGGTAACTGGAAGTCACCCTCAACAGACTCCACCACCTCCAGGAAAGCAATTTAATGGCACTATGCATTTAGCACCTGACTCATCAGGTGAGGCTCAGGTTCGCAATGGGCGGCCTCGAGCAGATGCCCGAGGAAGAAACCAGTTACTGCCACGGTACTGGCCCAGGTGTACTGATCTAGAACTACAACAAATATCCATAGATTCAAATTCTGTAATTACTCCCTTGTTTCAAAAAACCTTGAGTGCAAGTGATGCTGGACGAATTGGGCGTTTAGTCCTACCCAAAAAGTGTGCTGAGACCTACTTCCCACCAATTTCTCAGCCTGAAGGATTGCCGCTTAAAATCCTTGATGCAAAAGGAAAGGAGTGGATATTTCAATTTCGCTTCTGGCCAAACAATAACAGCAGAATGTATGTTTTAGAGGGTGTCACTCCATGCATACAGTCCATGCAGTTACAGGCAGGTGACACTGTAACATTTAGCCGGTTGGAGCCAGAGGGAAGGTTGGTTATGGGATTTAGAAAGGCTTCAAGTGCCGCGCCATCCGACCAGGACAATGAAACCAATAAGTCTGGAAATGGATTTTCTGCACATGGTGAAGTTGAATTGGCCGATCCTAATTCATGGTCTAAAGTTGATAAGTCAGGATACATAGCAAAAGAAGCACTGGGGAGTAAATCATTAATATCTAGGAAAAGAAAGAGCGGCATATTGGGCTCAAAGAGTAAACGACTAAGAATTGAAAATGAGGATTTAATAGAGTTGAAGATTACATGGCAAGAAGCTCAAGGTCTGCTCCGCCCTCCTCCTAGCCACATTCCGAGCATTGTTGTGATTGAAGGTTTTGAATTTGAGGAATACGAGGAAGCTCCAGTGCTTGGGAAGCCAACAATTTTTACCAGTGATAATGTGGGTGAAAAGATCCAGTGGGCTCAATGCGAAGAATGTCTCAAGTGGCGCAAATTACCAGCAAGTGCGCTTCTTCCATCAAAATGGACGTGTTCTGATAATTCATGGGATCCAGAAAGATCTTCTTGTTCAGCTGCACAAGAGCTGACAGCAGAACAACTTGAGAATTTGCTACCTCCGTGTAATTCAGCTGTTCCCAAGAGAATGAAGGCCACCAAACAGGATCCTGATAATGCTGAAGCTTTGGAGGGACTTGACACCCTCGCAAATTTAGCTATCCTGGGAGAGGGTGAGGCACTCCCAGCGTCAGCCCAGGCCACAACTAAGCACCCACGCCATAGACCTGGCTGTTCTTGCATTGTTTGCATTCAACCTCCCAGTGGAAAGGGCCCCAAGCATAAGCAGACATGTACATGTAATGTATGCTTAACAGTGAAGCGACGTTTCCATACCCTTATGTTACGGCGTGAGAAGAAACAATCCGAAAAAGAAGCAGAGACAACTCGTAAAAAACAACAGCAACAACATCCTCAACCTCTACCTTCGTCTGAAATTTTGCTTGACGAAGATTCATTACCCTGTAGTAACACAGGTGATAGCAGCCCGAATCAGAACAGAGAGGGTAATGATGGTTCTGATGATGATCCTAACAGAATAAAATCATCTGCTTCACCATTCAAAGGCCAAATTGACCTCAATATCCAGCCAGAGCGAGAAGAAGAATTGTCACCTGGTTCAGATTCTGGTGGCATGATGAAGTTGCTCCATGATGCTGCCACTGAGAGATATCTGAAGCAGCAGACTGTGAACTCCGGTACTGGAGATCCTGCAGGCAGTCAGGCACAGCTGGTAGGAGATGCAATGAGGGAAGATAAACTTAGCAATGGTGTTACCCATGGCAGTAGTAGTCATAGTACTGATAGGAACATGGCCAATCTTTGTCCATGA 2373 0.445 MEQFWHSNSILLSVSQPSNLPWPQSFSLQNRLSDRLRDLSAKGWNQLAGSGPVPWKQAPSLFNSASSSDLISDVPSLAELSSSFDKMYCNERLPASALEKKSEDFPGLPVHWNVTICPRDMKHMNGMRNEDKASSCLNMCQQPSSMKEESSPQPFGLPVPSSCQNERNGQLGVTGSHPQQTPPPPGKQFNGTMHLAPDSSGEAQVRNGRPRADARGRNQLLPRYWPRCTDLELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSAAPSDQDNETNKSGNGFSAHGEVELADPNSWSKVDKSGYIAKEALGSKSLISRKRKSGILGSKSKRLRIENEDLIELKITWQEAQGLLRPPPSHIPSIVVIEGFEFEEYEEAPVLGKPTIFTSDNVGEKIQWAQCEECLKWRKLPASALLPSKWTCSDNSWDPERSSCSAAQELTAEQLENLLPPCNSAVPKRMKATKQDPDNAEALEGLDTLANLAILGEGEALPASAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFHTLMLRREKKQSEKEAETTRKKQQQQHPQPLPSSEILLDEDSLPCSNTGDSSPNQNREGNDGSDDDPNRIKSSASPFKGQIDLNIQPEREEELSPGSDSGGMMKLLHDAATERYLKQQTVNSGTGDPAGSQAQLVGDAMREDKLSNGVTHGSSSHSTDRNMANLCP* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02743 790 CDD B3_DNA 246 347 IPR003340 GO:0003677
Phac6g02743 790 ProSiteProfiles B3 DNA-binding domain profile. 248 349 IPR003340 GO:0003677
Phac6g02743 790 MobiDBLite consensus disorder prediction 351 367 - -
Phac6g02743 790 MobiDBLite consensus disorder prediction 664 682 - -
Phac6g02743 790 MobiDBLite consensus disorder prediction 140 177 - -
Phac6g02743 790 MobiDBLite consensus disorder prediction 140 210 - -
Phac6g02743 790 MobiDBLite consensus disorder prediction 631 790 - -
Phac6g02743 790 SMART B3_2 248 349 IPR003340 GO:0003677
Phac6g02743 790 FunFam B3 domain-containing transcription repressor VAL1 226 353 - -
Phac6g02743 790 Pfam B3 DNA binding domain 248 347 IPR003340 GO:0003677
Phac6g02743 790 SUPERFAMILY DNA-binding pseudobarrel domain 245 347 IPR015300 -
Phac6g02743 790 Coils Coil 630 650 - -
Phac6g02743 790 Gene3D - 226 352 IPR015300 -
Phac6g02743 790 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 17 752 - -
Phac6g02743 790 Gene3D - 480 533 - -
Phac6g02743 790 MobiDBLite consensus disorder prediction 631 646 - -
Phac6g02743 790 Pfam CW-type Zinc Finger 481 523 IPR011124 GO:0008270
Phac6g02743 790 ProSiteProfiles Zinc finger CW-type profile. 476 526 IPR011124 GO:0008270
Phac6g02743 790 MobiDBLite consensus disorder prediction 738 753 - -
Phac6g02743 790 MobiDBLite consensus disorder prediction 770 790 - -
Phac6g02743 790 MobiDBLite consensus disorder prediction 346 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02743 Phac-Chr6 24848263 24860692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02743 99 750 B3 DNA Binding Superfamily AT4G32010 44.023 6.70e-168 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac6g02743 B3 1.1e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02743 K09287 - gmx:100782114 1447.95