Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02719 ATGGGAGCAGAGACGATGAAGAGGTGGAGCACCTGGGAGGAGCTCCTCCTTGGTGGGGCCATTCTCCGTCATGGAACCGATGATTGGAACATTGTCGCCACCGAGCTCCGAGCCCGAACAGGTTTTCCTTACACCATTACTCCTCAGGTATGTAAAGCCAAATATGAAGATCTGCAACAACGGTATTCTGGAAACAAGGCTTGGTATGAGGAGCTGAGGAAGACCAGAGTAGCAGAGTTGAAGAGATCTCTAGAGCTATCTGAAGATTCAATTGGGTCTCTTGAATCCAAGCTTGAAAGCCTCAAGGGTGGTAAGAATGAGAAAAGAGATGGTTGTGATGTTGATAATGGATCAGGTCGTTCAAAGTTGCATGTAGCTTCACATAAATTAGAAAGAGTTGAATCTTCCACCAAAGAGACATCAAAGGATGGACTATCTGCTGGGAGTTTCACACATGAAACTGGGACAAATGTGCCTGTTCAAGATTTGGATGCTAAGCCTGAGGTTTTGCACTCCACAAAGCAGCTTAAAGTTTTGAATGTAGATAAGTTAGCATATACTATATACGAAGGAGAAGGGGGGAGTTTTAAGAAACGAAGAGGGAAGAGGAAAAGGAAGGATTGTGGCAAAAATACCAAGGAAGCAAGTATAGCAGAAAGTGTTTTGTTAGATTCAGTTGATGTTATGTCATGGTGTAAAGAGAGTTCCACCAGTAACTACAGTGAAGTTGCCAAATCATGTGGTGTAAATTATCAAAATAGGAACTTGAAAAAGGGTAGGGTGGAAGACATGATGAAGATTTTGGATTCTATTTTTGAAACTAAATGTGCTTCTGCCTTTCGTCGTAGACTTGATAGTCAGAAGAGAGGGAGGTACAAGAAAATGATCAGACAACACATGGACTTTGACACCATAAGGTCAAGAATTAGCAACCAAACAATTAAATCAAGTGTAGAACTTTTCCGAGACTTGCTCCTACTCACTAACAATGCTTTAGTATTCTACTCCAAGAGCACTCGTGAGTACAAATCTGCTCTTCTACTAAGAGACACTGTGACCAAAAAAATAAAGGAAAGTTTGAAGGGCACGAGTAACAAAGTCACCACTCAAGTTACCAATGTGCCAGTTAAATTACCTATGCATAATCCTCATGTGAAACCAAGAAGTATAAGATCTGGCAGTAGAAAAATAGTTGCAAAACCAGGTGGTGGAAATAACTTAGTATCTGGAGTTTCACATGGTACAAAGAAACCTAGTAAAGTTGATTCTCCATCCTCAGTGGAATCCTTAAGCGTGAAGAAGAAAGGTTTTGGTCGACCAAAAAAGGTTGGACGAGGAACTGCAACTCAAAAGCCTGCAATACCAATGAAGGGAAAGAAAAAAGTTAAGAGCAAGTAA 1398 0.4099 MGAETMKRWSTWEELLLGGAILRHGTDDWNIVATELRARTGFPYTITPQVCKAKYEDLQQRYSGNKAWYEELRKTRVAELKRSLELSEDSIGSLESKLESLKGGKNEKRDGCDVDNGSGRSKLHVASHKLERVESSTKETSKDGLSAGSFTHETGTNVPVQDLDAKPEVLHSTKQLKVLNVDKLAYTIYEGEGGSFKKRRGKRKRKDCGKNTKEASIAESVLLDSVDVMSWCKESSTSNYSEVAKSCGVNYQNRNLKKGRVEDMMKILDSIFETKCASAFRRRLDSQKRGRYKKMIRQHMDFDTIRSRISNQTIKSSVELFRDLLLLTNNALVFYSKSTREYKSALLLRDTVTKKIKESLKGTSNKVTTQVTNVPVKLPMHNPHVKPRSIRSGSRKIVAKPGGGNNLVSGVSHGTKKPSKVDSPSSVESLSVKKKGFGRPKKVGRGTATQKPAIPMKGKKKVKSK* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02719 465 Coils Coil 77 97 - -
Phac6g02719 465 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 139 424 - -
Phac6g02719 465 MobiDBLite consensus disorder prediction 98 159 - -
Phac6g02719 465 MobiDBLite consensus disorder prediction 401 465 - -
Phac6g02719 465 MobiDBLite consensus disorder prediction 408 430 - -
Phac6g02719 465 Gene3D - 254 375 IPR036427 GO:0005515
Phac6g02719 465 SUPERFAMILY Bromodomain 262 360 IPR036427 GO:0005515
Phac6g02719 465 CDD Bromodomain 262 356 - -
Phac6g02719 465 MobiDBLite consensus disorder prediction 140 158 - -
Phac6g02719 465 Pfam Bromodomain 265 345 IPR001487 GO:0005515
Phac6g02719 465 MobiDBLite consensus disorder prediction 100 139 - -
Phac6g02719 465 SMART bromo_6 257 361 IPR001487 GO:0005515
Phac6g02719 465 CDD SANT 8 55 IPR001005 -
Phac6g02719 465 ProSiteProfiles Bromodomain profile. 272 342 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02719 Phac-Chr6 24738625 24744689 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac6g02719 Bromodomain 3.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02719 - - pvu:PHAVU_006G190000g 763.451