Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02705 ATGGACAATATTATCTACACTTTGGTTTTTATATTTATTCTATCTTTGAAGGCTAATACTGTTTGTTCTAGAGAGAGACAATGGGTGAGTTCTGGGAAGAATAATATTGCTGATCTTGTGACAAACTTGCCTGGCCAACCTCCTGTAGATTTCAAGCACTACGCTGGATATGTCACAGTCAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTCTTTGAGGCCATTACCAAGCCTCAACACAAACCATTGGTTCTGTGGCTTAATGGAGGACCTGGGTGCTCTTCTGTTGGATATGGAGCAACACAGGAGATTGGACCATTTTTAGTGGACACCGATGGCAAGAGCCTTATGTTTAATAACTTCTCATGGAACAAAGAGGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTATTCAAATACAACCAGCGAATATGCACAATTGGGAGATGACTTCACAGCTAATGATGCTTACACTTTTCTGCACAATTGGTTCCTCAAATTTCCATCATATAGAACAAGGACATTTTACATAGCTGGAGAAAGCTATGCAGGGAAGTATGTGCCGGAGCTGGCTGAACTCATCCATGACAGAAACAAGGATCCTTCTCTTCACATTGATCTCAAGGGAATTTTGTTGGGGAACCCTGAAACATCTGATGCTGAGGACTGGTCAGGTATGGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACATACAAAACAATCAAAGGAAGCTGTGACTTCAATAGCAGTGATCCATGGAGCAATAAAGATTGTAGTGAAGGAGTGGATGAAGTTCTCAAACAGTACAATGAAATTGATATCTACAGCCTCTACACCTCAGTATGCTTCGCCAGTACAGCTCGTTCCAATTATCAATCCATGCAAATGGTCATGCTTCGCTCATCTAAAATGATGCCACGAATCATGGGTGGTTATGACCCATGTTTGGATGACTATGCTAAAACTTTTTACAATAAACCAGATGTTCAGAAGGCACTCCATGCCAGTGATGGTCACAATCTGAGGAATTGGAGTATTTGCAATGACAACATATTCAAGCGCTGGAAACAATCAAAGACTTCTGTTATCCCAATCTACAAGAAGCTGATTTCAGCAGGACTAAGGATTTGGATTTACAGTGGAGACACCGATGGTAGGGTGCCAGTGTTGTCGACAAGATACAGCTTAAGTATTCTAGATTTGCCTATCACTAAGAAATGGAGGCCTTGGTACCATGAAAAGGAGGTAAGTGGGTGGTATCAGGAATACGAAGGGCTTACGTTTGCGACATTTCGGGGAGCTGGGCATGCAGTGCCATGCTTCAAACCTAGCAACTCCCTCGCATTCTTCTCCTCCTTTCTTAATGCATATTCACCACCCTCTACTAAATAA 1419 0.4207 MDNIIYTLVFIFILSLKANTVCSRERQWVSSGKNNIADLVTNLPGQPPVDFKHYAGYVTVNETNGRALFYWFFEAITKPQHKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKSLMFNNFSWNKEANMLFLESPVGVGFSYSNTTSEYAQLGDDFTANDAYTFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNKDPSLHIDLKGILLGNPETSDAEDWSGMVDYAWSHAVISDETYKTIKGSCDFNSSDPWSNKDCSEGVDEVLKQYNEIDIYSLYTSVCFASTARSNYQSMQMVMLRSSKMMPRIMGGYDPCLDDYAKTFYNKPDVQKALHASDGHNLRNWSICNDNIFKRWKQSKTSVIPIYKKLISAGLRIWIYSGDTDGRVPVLSTRYSLSILDLPITKKWRPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLNAYSPPSTK* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02705 472 SUPERFAMILY alpha/beta-Hydrolases 37 466 IPR029058 -
Phac6g02705 472 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Phac6g02705 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Phac6g02705 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Phac6g02705 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Phac6g02705 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Phac6g02705 472 FunFam Carboxypeptidase 371 465 - -
Phac6g02705 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 452 IPR001563 GO:0004185|GO:0006508
Phac6g02705 472 Pfam Serine carboxypeptidase 44 464 IPR001563 GO:0004185|GO:0006508
Phac6g02705 472 Gene3D alpha/beta hydrolase 35 293 IPR029058 -
Phac6g02705 472 Gene3D - 324 362 - -
Phac6g02705 472 Gene3D - 371 465 - -
Phac6g02705 472 FunFam Carboxypeptidase 34 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02705 Phac-Chr6 24652210 24656759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02705 329 465 Calmodulin-binding Proteins AT2G22960 33.333 1.65e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02705 K16297 - gmx:100819700 888.256