Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02703 ATGGACAATATTATCTACACTTTGGTTTTTATATTTATTCTATCTTTGAAGGCTAATACTGTTTGTTCTAGAGAGAGACAATGGGTGAGTTCTGGGAAGAATAATATTGCTGATCTTGTGACAAACTTGCCTGGCCAACCTCCTGTAGATTTCAAGCACTACGCTGGATATGTCACAGTCAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTCTTTGAGGCCATTACCAAGCCTCAACACAAACCATTGGTTCTGTGGCTTAATGGAGGACCTGGGTGCTCTTCTGTTGGATATGGAGCAACACAGGAGATTGGACCATTTTTAGTGGACACCGATGGCAAGAGCCTTATGTTTAATAACTTCTCATGGAACAAAGAGGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTATTCAAATACAACCAGCGAATATGCACAATTGGGAGATGACTTCACAGCTAATGATGCTTACACTTTTCTGCACAATTGGTTCCTCAAATTTCCATCATATAGAACAAGGACATTTTACATAGCTGGAGAAAGCTATGCAGGGAAGTATGTGCCGGAGCTGGCTGAACTCATCCATGACAGAAACAAGGATCCTTCTCTTCACATTGATCTCAAGGGAATTTTGTTGGGGAACCCTGAAACATCTGATGCTGAGGACTGGTCAGGTATGGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACATACAAAACAATCAAAGGAAGCTGTGACTTCAATAGCAGTGATCCATGGAGCAATAAAGATTGTAGTGAAGGAGTGGATGAAGTTCTCAAACAGTACAATGAAATTGATATCTACAGCCTCTACACCTCAGTATGCTTCGCCAGTACAGCTCGTTCCAATTATCAATCCATGCAAATGGTCATGCTTCGCTCATCTAAAATGATGCCACGAATCATGGGTGGTTATGACCCATGTTTGGATGACTATGCTAAAACTTTTTACAATAAACCAGATGTTCAGAAGGCACTCCATGCCAGTGATGGTCACAATCTGAGGAATTGGAGTATTTGCAATGACAACATATTCAAGCGCTGGAAACAATCAAAGACTTCTGTTATCCCAATCTACAAGAAGCTGATTTCAGCAGGACTAAGGATTTGGATTTACAGTGGAGACACCGATGGTAGGGTGCCAGTGTTGTCGACAAGATACAGCTTAAGTATTCTAGATTTGCCTATCACTAAGAAATGGAGGCCTTGGTACCATGAAAAGGAGGTATAA 1278 0.4131 MDNIIYTLVFIFILSLKANTVCSRERQWVSSGKNNIADLVTNLPGQPPVDFKHYAGYVTVNETNGRALFYWFFEAITKPQHKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKSLMFNNFSWNKEANMLFLESPVGVGFSYSNTTSEYAQLGDDFTANDAYTFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNKDPSLHIDLKGILLGNPETSDAEDWSGMVDYAWSHAVISDETYKTIKGSCDFNSSDPWSNKDCSEGVDEVLKQYNEIDIYSLYTSVCFASTARSNYQSMQMVMLRSSKMMPRIMGGYDPCLDDYAKTFYNKPDVQKALHASDGHNLRNWSICNDNIFKRWKQSKTSVIPIYKKLISAGLRIWIYSGDTDGRVPVLSTRYSLSILDLPITKKWRPWYHEKEV* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02703 425 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Phac6g02703 425 Gene3D alpha/beta hydrolase 35 293 IPR029058 -
Phac6g02703 425 Gene3D - 371 425 - -
Phac6g02703 425 Gene3D - 324 362 - -
Phac6g02703 425 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 421 IPR001563 GO:0004185|GO:0006508
Phac6g02703 425 SUPERFAMILY alpha/beta-Hydrolases 37 421 IPR029058 -
Phac6g02703 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Phac6g02703 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Phac6g02703 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Phac6g02703 425 Pfam Serine carboxypeptidase 44 422 IPR001563 GO:0004185|GO:0006508
Phac6g02703 425 FunFam Carboxypeptidase 34 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02703 Phac-Chr6 24652210 24656759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02703 329 419 Calmodulin-binding Proteins AT2G22960 37.363 2.08e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02703 K16297 - gmx:100819700 805.438