Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02693 ATGGGCTTGAGTTCTAAGCAGGTTTCTAATAGAGGGCTTGATTGGGACCAGAATTTGTTGCAGGCTCAAAACTTGGAGCTCCCAAAGCCTACTCCTATGAGGAAACAACAGCAACAAACTCAGCCATCAGAGCCTTTGAAGTGTCCAAGATGTGACTCCATTAACACCAAATTCTGTTACTACAACAACTACAACAAGTCTCAACCTCGCCATTTCTGCAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTGCGCAACGTTCCTGTTGGTGGTGGTAGAAAGAATAAGCGAGTCAAGAAATCAACCTCAGCTACAACCACCACCTCAAATGGCAACATGGATGGTGAGTTGAGAACCCACGTCACAATCCCTCCTCTTGCAGTGGATGATCACAAAACCACACCTTCCTCTCTCTACCGATCCTTGTGCTTGCCACAACAGAATCTGACGAGTACCAAAGTTTCAGAAGGCAGAGACTTTGCTATTGGCAATGGAATCTTTCTGAGTTCAACTCTGCCTTTACCTCAAAACCAAAACCTTCTCTTCCCTTTCACAACCTCAAACTCTTTTGACACAAACACATGTGCAGTATCCAACTCTTTGCAATCTTCCAGTGTGTATAACTACGGTGAAGAGTTTAAAATACTGGAGGAGCCAACCGTAAACAGTACAATTCCCAGCAGTAGTGGTGGCAACAGGACACAGCCATGGGAGATAGCAGCAACAAGTTCTGGTTTGGAAATGTCCAACTATTGGAGTTGGGAGGACATTGATTCGTTGGTCTCAACTGATCCAAATAATCCTTGGGATGATTCTGACATCAAACCCTGA 837 0.4504 MGLSSKQVSNRGLDWDQNLLQAQNLELPKPTPMRKQQQQTQPSEPLKCPRCDSINTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSTSATTTTSNGNMDGELRTHVTIPPLAVDDHKTTPSSLYRSLCLPQQNLTSTKVSEGRDFAIGNGIFLSSTLPLPQNQNLLFPFTTSNSFDTNTCAVSNSLQSSSVYNYGEEFKILEEPTVNSTIPSSSGGNRTQPWEIAATSSGLEMSNYWSWEDIDSLVSTDPNNPWDDSDIKP* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02693 278 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
Phac6g02693 278 MobiDBLite consensus disorder prediction 103 118 - -
Phac6g02693 278 Pfam Dof domain, zinc finger 45 98 IPR003851 GO:0003677|GO:0006355
Phac6g02693 278 MobiDBLite consensus disorder prediction 89 119 - -
Phac6g02693 278 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Phac6g02693 278 MobiDBLite consensus disorder prediction 26 47 - -
Phac6g02693 278 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 198 IPR045174 GO:0003700|GO:0006355
Phac6g02693 278 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02693 Phac-Chr6 24575318 24578001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02693 29 133 C2C2-Dof Transcription Factor Family AT5G60200 50.000 5.43e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac6g02693 zf-Dof 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02693 - - vra:106774613 504.982