LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac6g02646	ATGATCAGACACCAGCAGAAACACACATGCCCTCTTCCACCACTTCTACTGATTCTTCTCTTTTTCAACTTCACATGTGCCATTGATTTCGTCTTCAACGGCTTCAACTCCTCTGAAGTGTTGATCTTTGGAAACGCCACCATTGATTCTCGAATTCTAACACTAACACATCATCAAACTTTCTCCATCGGTCGTGCCTTGTACAGGGAAAAAATTCCCACCAAGAAACCAAACTCTTCTTTTGTGTACCCTTTCTCCACCTCTTTCATCTTTGCCATGGCACCTTATGAAGACACTCTTCCAGGGCATGGCTTGGTTTTCATCTTTACACCTGTCACGGGCATCCAAGGCACAAGTTCTGCACAACACCTTGGTCTTTTCAACCTCACCAACAACGGAAACCCAAGCAACCATGTGCTTGGTGTTGAGTTCGACGTGTTCATGAACCAAGAGTTCGATGACTTCAACGCCAATCATGTGGGGATTGACATAAACTCTCTCAAGTCTTTTGTTTCCAATGATTCTGGGTATTGGCAAGATGATGGTGACAAGTCCTTTAAGGAGTTGACGCTTAACAGCGGTGAGAATTACCAAGTTTGGATTGACTATGAAGATTCTTGGATGAATGTTACCATGGCACCGGTTGGTATGAAAAGGCCTAGTAGGCCTTTGTTGAATGTTTCTCTCAACTTATCTGAGGTTTTTGAGGATGAAATGTTCGTTGGGTTTACTAGTGCCACTGGTCAATTAGTTCAAAGTCACAAGATTTTGGGCTGGAGTTTCAGCAATGATAATATTTCGTTGAGTGATGAACTTATTACTACTGGGTTACCATCTTTTGTTCTTCCAAAAGATTCAATTTTTAAGTCCAAGGGGTTTGTTGCAGGGTTTACTGTTGGAGTTTTCTTAGTTATTTGTGTCTTGGTATTGTTGGCACTGATTTTGATTCAGTGGAAGCGTAGGAGAGAAAGGAAGAGGCAGGAAATGGAAGATTGGGAGTTGGAGTATTGGCCACACAGAATGGCGTATGAAGAAATTGAGGCAGCAACAAAGGGGTTCTCTGAGGAGAATGTGATTGGGGTTGGTGGGAATGGGAAAGTCTACAAGGGTGTTCTAAGAGGAGGGGTGGAGATTGCTGTGAAGCGCATTTCTCATGAAAATGATGGCGTGCGAGAATTTCTTGCTGAAGTTTCAAGCCTTGGGAGACTGAAGCAAAGGAATTTGGTGGGGTTGAGAGGTTGGGGCAAGAAAGATGTTGGGATTTTCTTCTTAGTCTATGACTACATGGAAAACGGTAGCTTGGACAAGAGGGTGTTTGATTGTGATGAGAGGAAGATGTTGAGTTATGAAGACAGGATAAGGATCATCAAAGATGTTGCTTTTGCAGTTTTGTACTTGCATGAGGGGTGGGAAGCTAAGGTTGTGCACAGGGACATCAAGGCCAGCAATGTTTTGCTTGATAAGGATATGAATGGAAAGCTTGGGGATTTCGGGTTAGCCAGAATGCACAGCCATGGTCAAGTTGCTAGCACCACCAAATTGGTTGGAACAGTGGGGTACATGGCTCCCGAAATGTTCAAGACTGGAAGAGCTTCCACTCAGACAGATGTTTACATGTTTGGTATCTTGATTTTAGAGGTTTTGTGTGGAAGGAGACCTCTAGAAGAAGGTAAGGTACCTTTGGTGGAGTGGGTTTGGCAACTAATGGTACAAGGGCAAATTGTTTTTGCACTTGATGAAAGATTAAGGGCCAAGGGAGAGTTCAGTGAGCAAGAGGTGGAGAGGTTAATGCAGTTGGGTTTGTTGTGTGCCTACCCTGAACCAAAGGCCAGGCCCACAATGAGACAAGTGGTGAATGTTCTAGAGGGGAAGAAAGAGGTCGATGATTCAGAAATTGAGAATATGGATAGTTATTTGCTCCAACAGTTGAAATCAAGGGATATATTGTCTGAGTATTCCCAATACTTTAGCTTTGCCTCACACCCAACTTTTCAAGATATTCGTATCTCTTCCTCAATGTCTCTTGCTTGGTCCGAATCTGTAGTTGATGGTAGGTGA	2058	0.4339	MIRHQQKHTCPLPPLLLILLFFNFTCAIDFVFNGFNSSEVLIFGNATIDSRILTLTHHQTFSIGRALYREKIPTKKPNSSFVYPFSTSFIFAMAPYEDTLPGHGLVFIFTPVTGIQGTSSAQHLGLFNLTNNGNPSNHVLGVEFDVFMNQEFDDFNANHVGIDINSLKSFVSNDSGYWQDDGDKSFKELTLNSGENYQVWIDYEDSWMNVTMAPVGMKRPSRPLLNVSLNLSEVFEDEMFVGFTSATGQLVQSHKILGWSFSNDNISLSDELITTGLPSFVLPKDSIFKSKGFVAGFTVGVFLVICVLVLLALILIQWKRRRERKRQEMEDWELEYWPHRMAYEEIEAATKGFSEENVIGVGGNGKVYKGVLRGGVEIAVKRISHENDGVREFLAEVSSLGRLKQRNLVGLRGWGKKDVGIFFLVYDYMENGSLDKRVFDCDERKMLSYEDRIRIIKDVAFAVLYLHEGWEAKVVHRDIKASNVLLDKDMNGKLGDFGLARMHSHGQVASTTKLVGTVGYMAPEMFKTGRASTQTDVYMFGILILEVLCGRRPLEEGKVPLVEWVWQLMVQGQIVFALDERLRAKGEFSEQEVERLMQLGLLCAYPEPKARPTMRQVVNVLEGKKEVDDSEIENMDSYLLQQLKSRDILSEYSQYFSFASHPTFQDIRISSSMSLAWSESVVDGR*	686

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac6g02646	685	Pfam	Legume lectin domain	28	266	IPR001220	GO:0030246
	Phac6g02646	685	Pfam	Protein kinase domain	354	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac6g02646	685	FunFam	L-type lectin-domain containing receptor kinase S.4	429	634	-	-
	Phac6g02646	685	PANTHER	-	44	625	-	-
	Phac6g02646	685	Gene3D	-	26	271	-	-
	Phac6g02646	685	SMART	serkin_6	353	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac6g02646	685	CDD	STKc_IRAK	359	623	-	-
	Phac6g02646	685	SUPERFAMILY	Protein kinase-like (PK-like)	329	622	IPR011009	-
	Phac6g02646	685	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	474	486	IPR008271	GO:0004672\|GO:0006468
	Phac6g02646	685	SUPERFAMILY	Concanavalin A-like lectins/glucanases	27	271	IPR013320	-
	Phac6g02646	685	ProSiteProfiles	Protein kinase domain profile.	353	639	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac6g02646	685	FunFam	L-type lectin-domain containing receptor kinase S.4	26	269	-	-
	Phac6g02646	685	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	315	428	-	-
	Phac6g02646	685	Coils	Coil	315	335	-	-
	Phac6g02646	685	ProSitePatterns	Protein kinases ATP-binding region signature.	359	381	IPR017441	GO:0005524
	Phac6g02646	685	Gene3D	Transferase(Phosphotransferase) domain 1	429	645	-	-
	Phac6g02646	685	Gene3D	Phosphorylase Kinase; domain 1	315	428	-	-
	Phac6g02646	685	CDD	lectin_legume_LecRK_Arcelin_ConA	28	262	IPR001220	GO:0030246

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac6g02646	Phac-Chr6	24318344	24320401	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac6g02646	23	577	Receptor kinase-like Gene Family	AT4G04960	67.500	0.0	737

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Phac6g02646		Pkinase	4.4e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac6g02646	-		-	gmx:100804391	1189.87