Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02641 ATGGAGAACAACCCTAGTTCATCAGTTGATAGAAAATTCACTGAGAGGAATAGAAGAAATCAAATGAAAGCTCTCTTCCGCAAACTCAACTCACTTGTGCCTCATCAAAGAACAAAGGCGGTTTCACTCCCGGATCAGCTAGAAGAAGCAACAACCTACATAAAGAAATTACAGATGAATATGGAGAAAATGAAGAAGAAGAAGAGCATGCTACTGGGAATAATAGAAAGGCCAAATGTGAGAATGAATGAAGGAGGAAAGAGCTTAGGGTTAAAATCTCCACGGATTGAGATCCAACAAATGGGTTCAGCCTTAGAGGTAGTTCTAGTAACTGGGTTGGATTCTCAGTTCATGTTTCGTGAAACCATTCGTGTTCTTCATGAAGAAGGAGTAGATGTTGTTAACGCCAGTTATAATGTTATTGAAGATGAAGTTTTCCATTCAATACACTGTCAGGTGAGCTAA 465 0.3914 MENNPSSSVDRKFTERNRRNQMKALFRKLNSLVPHQRTKAVSLPDQLEEATTYIKKLQMNMEKMKKKKSMLLGIIERPNVRMNEGGKSLGLKSPRIEIQQMGSALEVVLVTGLDSQFMFRETIRVLHEEGVDVVNASYNVIEDEVFHSIHCQVS* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02641 154 Gene3D - 6 86 IPR036638 GO:0046983
Phac6g02641 154 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 57 IPR011598 GO:0046983
Phac6g02641 154 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 82 IPR036638 GO:0046983
Phac6g02641 154 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 8 152 - -
Phac6g02641 154 Pfam Helix-loop-helix DNA-binding domain 14 58 IPR011598 GO:0046983
Phac6g02641 154 Coils Coil 47 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02641 Phac-Chr6 24280060 24281705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02641 6 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 46.497 8.41e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac6g02641 HLH 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02641 - - gmx:100784418 227.639