Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02640 ATGGAGAACAACCCTAGTTCATCAGTTGATAGAAAATTCACTGAGAGGAATAGAAGAAATCAAATGAAAGCTCTCTTCCGCAAACTCAACTCACTTGTGCCTCATCAAAGAACAAAGGCGGTTTCACTCCCGGATCAGCTAGAAGAAGCAACAACCTACATAAAGAAATTACAGATGAATATGGAGAAAATGAAGAAGAAGAAGAGCATGCTACTGGGAATAATAGAAAGGCCAAATGTGAGAATGAATGAAGGAGGAAAGAGCTTAGGGTTAAAATCTCCACGGATTGAGATCCAACAAATGGGTTCAGCCTTAGAGGTAGTTCTAGTAACTGGGTTGGATTCTCAGTTCATGTTTCGTGAAACCATTCGTGTTCTTCATGAAGAAGGAGTAGATGTTGTTAACGCCAGTTATAATGTTATTGAAGATGAAGTTTTCCATTCAATACACTGTCAGGAGGAGAAATCTGCTAACAGAGCTGCCAGAATATCTGAGAGGCTAAAGAACTTCATCTATGATTCTACCTACGTACTGTGA 537 0.3948 MENNPSSSVDRKFTERNRRNQMKALFRKLNSLVPHQRTKAVSLPDQLEEATTYIKKLQMNMEKMKKKKSMLLGIIERPNVRMNEGGKSLGLKSPRIEIQQMGSALEVVLVTGLDSQFMFRETIRVLHEEGVDVVNASYNVIEDEVFHSIHCQEEKSANRAARISERLKNFIYDSTYVL* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02640 178 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 8 172 - -
Phac6g02640 178 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 57 IPR011598 GO:0046983
Phac6g02640 178 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 82 IPR036638 GO:0046983
Phac6g02640 178 Gene3D - 6 86 IPR036638 GO:0046983
Phac6g02640 178 Pfam Helix-loop-helix DNA-binding domain 14 58 IPR011598 GO:0046983
Phac6g02640 178 Coils Coil 47 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02640 Phac-Chr6 24280060 24281705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02640 6 171 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 44.318 5.78e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac6g02640 HLH 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02640 - - gmx:100784418 258.84