Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02637 ATGAAGTTCAACATTGCGAATCCGACCACCGGTTGTCAGAAGAAGCTGGAGATCGATGACGACCTTAAGCTACGAGCATTTTGGGACAAGAGGATCTCTCAAGAGGTTCTTGGTGATGCTTTGGGAGAGGAATTCAAAGGCTATGTCTTCAAAATCACTGGAGGATGTGACAAGCAAGGATTTCCAATGAAACAAGGAGTGTTGACCCCTGGCCGTGTTCGTCTCCTGCTGCACAGAGGAACTCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAGCGCAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTTTCTGTTTTGAATTTGGTAATTGTAAAGAAGGGTGAAAATGATTTACCAGGCCTGACAGATGTTGAAAAGCCAAGGATGAGGGGTCCAAAGAGAGCTTCCAAAATTCGCAAGTTGTTCAACTTGTCTAAGGATGATGATATGAGGAAGTATGTCAACACATACAGGAGAACATTTACAACTAAAGCTGGTAATGTGTATTCTATCTGCAATTGTTCTACGTAG 546 0.4487 MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDMRKYVNTYRRTFTTKAGNVYSICNCST* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02637 181 PANTHER 40S RIBOSOMAL PROTEIN S6 1 172 IPR001377 GO:0003735|GO:0005840|GO:0006412
Phac6g02637 181 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Phac6g02637 181 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Phac6g02637 181 Gene3D - 133 178 - -
Phac6g02637 181 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02637 Phac-Chr6 24254589 24256704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02637 1 120 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 92.500 8.20e-81 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02637 K02991 - gmx:100804076 333.954