Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02629 ATGGAAGAAAGTTGGAGTGAGGGGAAAAGGAGCATGAATTACAAGGATGATGAGGATGATTATGAGGAAGAAGAAGAGGAGGAGGGCAGTGAGTACGGCGAGGATGGTAGGAAGAAGAGGGTGGCGCCTAACAAGAGAGCCTCCAAAGCTGGTGGCTCAATGCCACCTTCATGTCAAGTTGATGGCTGTAATGCTGATCTAAGTGATGCTAAGCCCTACCACAGGCGTCACAAGGTTTGTGAGTACCATGCCAAGGCTCCTGCTGTACTCATTGCAGAGCACCACCAACGGTTTTGCCAACAATGCAGTAGGTTTCATGAGCTATCAGAATTCGATGAATCAAAAAGGAGTTGCAGAAGACGTTTGGCTGGACATAATGAGAGGCGTCGCAAAAATGCATCTGAATATGGACATTGA 417 0.4748 MEESWSEGKRSMNYKDDEDDYEEEEEEEGSEYGEDGRKKRVAPNKRASKAGGSMPPSCQVDGCNADLSDAKPYHRRHKVCEYHAKAPAVLIAEHHQRFCQQCSRFHELSEFDESKRSCRRRLAGHNERRRKNASEYGH* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02629 138 Pfam SBP domain 58 131 IPR004333 GO:0003677
Phac6g02629 138 MobiDBLite consensus disorder prediction 17 31 - -
Phac6g02629 138 FunFam Squamosa promoter-binding-like protein 14 49 119 - -
Phac6g02629 138 Gene3D - 48 119 IPR036893 GO:0003677|GO:0005634
Phac6g02629 138 MobiDBLite consensus disorder prediction 110 138 - -
Phac6g02629 138 MobiDBLite consensus disorder prediction 1 59 - -
Phac6g02629 138 ProSiteProfiles Zinc finger SBP-type profile. 55 132 IPR004333 GO:0003677
Phac6g02629 138 MobiDBLite consensus disorder prediction 1 16 - -
Phac6g02629 138 PIRSF SBP 4 138 IPR017238 GO:0003677|GO:0003700|GO:0009908
Phac6g02629 138 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 11 133 IPR044817 GO:0003677
Phac6g02629 138 SUPERFAMILY SBT domain 56 135 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02629 Phac-Chr6 24198150 24200282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02629 1 135 SBP-box Gene Family AT2G33810 56.296 1.14e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac6g02629 SBP 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02629 - - vra:106775516 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02629 6 24198150 24200282 Phac6g02629 6 24198150 24200282 ECH