Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02603 ATGGGGATGGACTATTATGGGATTTTGGAGGTTGACAATAATGCCTCAGATGAAGAATTGAAGAAAGCCTACAGAAAGCTTGCAATGAAATGGCACCCAGATAAGAATCCAACCAATAAAAAAGAGGCTGAGATTAGATTCAAACAGATATCTGAAGCCTACGAGGTTCTAAGTGATCCCCAGAAGAGAGAAATTTATGATAGGTATGGAGAAGGTGGCCTTAAAGGTGGAATGCCAACACCGGATGAAGGTACAGCTTCCTTCTTCCGAACTGGGCATGGCCCAGCACCATTTAGGTTCAATCCCAGAAATGCAAACAACATTTTTGCGGAAGTGTTTGGGAGTTCACACCCATTTGGAGGAATGGGAATGGGGTTTGACTGTGGTGGCAGAGGCAGAGGCAGAGGCATGGGCATGAGGGGAGGATCGTGGGTATCAAGGTCGTTTGGTGGAATGTTTGGCAATGACATGTTCAGAGAAGGCAGACCAATGAATGAAGGTCCACGCCGCAAGGCTCCTCCCATCGAAAATACATTGCTTTGCAGCCTTGAGGAGCTCTACAAGGGGAGTACCAGAAAGATGAAAATCTCAAGGGAAATTGTACATGCAAGCGGGATGGTTTTTCCTGTGGAGGAAATATTGAACATTGAAATCCAACCGGGCTGGAAGAAGGGAACTAAAATCACTTTCCCAGAGAAAGGAAATGAGCAGCCAAATGTCATTGCAGCTGATATTGTGTTTATTATTGATGAGAAACCTCACGGCATATTTACAAGAGTTGGTAATGATTTGGTTGTGACACAAAAGATATCACTTACAGAAGCTGAAGCTCAACAAGGCTACACCATCCAACTTACAACTCTAGATGGCAGGGGTCTGAACATCGCCATAAACAACGCCACTGATCCAGATTACGAAGAAGTCCTCACCGGGGAAGGCATGCCAATTTCCAAAGATCCTTCGAAGAGGGGTAACCTTAGGATCAAATTCAACATCGAAATCCCAAACATAGTTGGTGCCTGA 1023 0.4487 MGMDYYGILEVDNNASDEELKKAYRKLAMKWHPDKNPTNKKEAEIRFKQISEAYEVLSDPQKREIYDRYGEGGLKGGMPTPDEGTASFFRTGHGPAPFRFNPRNANNIFAEVFGSSHPFGGMGMGFDCGGRGRGRGMGMRGGSWVSRSFGGMFGNDMFREGRPMNEGPRRKAPPIENTLLCSLEELYKGSTRKMKISREIVHASGMVFPVEEILNIEIQPGWKKGTKITFPEKGNEQPNVIAADIVFIIDEKPHGIFTRVGNDLVVTQKISLTEAEAQQGYTIQLTTLDGRGLNIAINNATDPDYEEVLTGEGMPISKDPSKRGNLRIKFNIEIPNIVGA* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02603 340 CDD DnaJ_C 173 335 - -
Phac6g02603 340 FunFam DnaJ subfamily B member 13 3 123 - -
Phac6g02603 340 Pfam DnaJ C terminal domain 176 335 IPR002939 -
Phac6g02603 340 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Phac6g02603 340 CDD DnaJ 4 59 IPR001623 -
Phac6g02603 340 PRINTS DnaJ domain signature 6 24 IPR001623 -
Phac6g02603 340 PRINTS DnaJ domain signature 24 39 IPR001623 -
Phac6g02603 340 PRINTS DnaJ domain signature 62 81 IPR001623 -
Phac6g02603 340 PRINTS DnaJ domain signature 42 62 IPR001623 -
Phac6g02603 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 257 336 IPR008971 GO:0006457|GO:0051082
Phac6g02603 340 Gene3D DnaJ domain 2 123 IPR036869 -
Phac6g02603 340 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 336 - -
Phac6g02603 340 SUPERFAMILY Chaperone J-domain 3 99 IPR036869 -
Phac6g02603 340 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Phac6g02603 340 Gene3D - 254 336 - -
Phac6g02603 340 Gene3D - 174 252 - -
Phac6g02603 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 169 265 IPR008971 GO:0006457|GO:0051082
Phac6g02603 340 SMART dnaj_3 3 62 IPR001623 -
Phac6g02603 340 FunFam Dnaj homolog subfamily b member 171 252 - -
Phac6g02603 340 FunFam DnaJ subfamily B member 13 254 336 - -
Phac6g02603 340 Pfam DnaJ domain 4 67 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02603 Phac-Chr6 24035576 24039036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02603 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 1.60e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02603 K09510 - gmx:100794650 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02603 6 24035576 24039036 Phac6g02603 6 24035576 24039036 ECH