Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02597 ATGTCACTGCTTCCTCTCTTCTTCCTCTTGAGCGTGGTTCTTTTCCAGCAAACCTTCTTCATCTCTGCTCTGAACCAGGATGGTTTATATCTGTACCAGTGGAAGCAATCCCTGGATGACCCTGACTCATCACTGGCGTCCTGGAAAAACCGCGACACCACCCCATGCAACTGGGCCGGCGTCACTTGTGGCCCAAATACCAGCGCCGTCACTTCACTCGACCTCTCCAACTTCAACGTCGCAGGCCCATTCTCCGCCACCTTCCTCTGCCGCCTCCCCAACCTCACCTCCATCATCCTCTTCAACAACTCCATCAACCAAACCCTCCCTCTCCAAATATCCCTCTGCACCCCTCTCATCCACCTCGACCTCTCCCAGAACCTCCTCACCGGCACTCTCCCCCACACCCTCCCCCTCCTCCCCAGCCTCCGCTACCTCGACCTCACCGGCAACAACTTCTCCGGCCCCATTCCCCCCTCCTTCGGAACCTTCCAGAACCTCCAAACCCTCTCCCTCGTATTCAACCTCCTCGACGACGTCCTTCCGCCTTCTCTCTTCAACATCACCTCCCTCAAAACGCTCAACCTCTCCTACAACCCCTTCCATCCTTCCCCCATTCCTTCCTCCCTCGGCAACCTCACCAACCTCGAAACGCTCTGGCTCAGCGCCTGCAATCTCGTCGGCCCCATACCCGACTCCCTCGGGAACCTCAAAAGCCTTCGCGTCTTGGATTTGACCTCCAACAACCTCTATGGACCCATCCCCAGTTCGCTCACTCGCATCACCACTGTCAAGCAGATTGAGTTGTACAACAACTCGCTCTCCGGTGAATTGCCTAAAGGAATCTCCAACCTCACTTCGTTGAGGCTCTTTGATGTTTCCATGAACCATTTGAGTGGGAGCATTCCCGATGAGTTGTGTCGTCTGCCTCTCGAGAGTCTCAACCTCTATGAGAACGGTTTCACCGGGGAGTTGCCGCCGAGCATTGCTGACTCGCCCAACCTTTATGAGCTTAAGGTGTTCGGGAACAAACTCACCGGGAAATTGCCGGACAGTTTAGGGAAGTCTGCTCCTTTGAGGTGGCTTGACGTTTCCACCAACCGTTTCTCCGGTGGGATTCCGACGAGTCTCTGCGCGCGCGGCGAGCTGGAGGAGTTGTTGATGCTCGGGAACGAGTTCTCTGGGGAGATACCGGCCAGTTTGGGCTCGTGTCGGAGCTTGACGCGTGTGAGGTTGGCTACGAACCGGTTGTCCGGCGAGGTTCCGGCGGGTATGTGGGGTCTTCCACATGTGTATTTGCTTGAACTGATGGATAACTTGTTTAGTGGCTCGATTGCGAGGACAATTGGTGGGGCGGGGAATTTGTCGTCGTTGATTCTGACGAAGAACAATTTCTCCGGTGTGATCCCCGACGAGATTGGGTGGTTGGAGAATCTTCAAGAGTTTTCTGGTGGTGATAACAGGTTTAGTGGGTCGTTGCCTGGGAATGTTGTGAATCTTGGGCAGCTTGGGACTCTTGATCTTCACAACAATATGTTATCCGGGGAGCTCCCCGAGGGGATTCAATCGTGGAAGAAACTCAATGACTTGAATTTGGCTAATAATATGATTGGTGGGAAGATTCCTGATGGAATTGGCAGTTTGGCTGTGTTGAATTTTCTTGATCTTTCCAACAATCAATTTTCTGGGAATGTTCCTATGGGGTTGCAGAATTTGAAGCTCAATCAGCTTAATTTGTCTTATAATAGGCTTTCTGGAAACCTTCCCCCACTGCTGTCCAAGGATATGTACAGGGATAGTTTTATTGGTAATCCTGGCTTGTGCGGGGATTTCAAAGGTTTGTGTGATGGCAAAGATGGGGATAAGGGTAAGGGTTTTGTGTGGATTCTGAGAGCTATTTTTATAGTTGCCACTTTGGTGTTTGTCATCGGTGTGGTCTGGTTTTTCTTAAGGTATAGGAATTTCAAGAATGCTGAGAGATCTGTTGATAAATCAAAGTGGACTTTGATGTCGTTTCATAAACTGGGTTTCAGCGAAGATGAGATCTTGAATTGCCTCGATGAAGATAATGTGATAGGAAGTGGGTCTTCCGGGAAGGTTTACAAGGTTGTGTTGACCAGCGGCGAAGTGGTTGCTGTGAAGAAGATATGGGGTGGGGTCAAGAAGGAAATAGACAGTGGAGATGTGGAGAGGGGTCAGTTTTATCAAGACAGTGCTTTTGACGCAGAGGTTGAAACTTTGGGAAAAATCAGGCACAAGAACATTGTCAAACTGTGGTGTTGCTGCACTACTAGGGACAGCAAGCTATTGGTTTATGAGTATATGCCGAATGGTAGTCTGGGTGATTTGCTGCATAGCAATAAAGGAGGGTTGTTGGATTGGCCAACTAGGTATAAGATAGCTGTTGATGCTGCAGAAGGGCTCTCTTATTTGCATCACGACTGTGTTCCTTCAATTGTTCATAGAGATGTGAAATCTAATAACATCTTGTTGGATGGGGACTTCGGTGCAAGGGTGGCGGATTTTGGAGTGGCTAAGGTAGTTGATGCCACCGGGAAAGGAACGAAATCCATGTCTGTCATAGCTGGGTCTTGTGGGTACATTGCACCAGACGAAATTTGCAAGGTCCTCAACATTGGCCTCATGTGCACCAGTCCTCTTCCAATCAACCGGCCTGCAATGAGAAGGGTGGTGAAGATGTTACAAGAGGTGGGCACAGAGAACCAAACAAAACCAGCCAAGAAAGATGGAAAGTTGTCCCCATATTACTATGACGATGGCTCTGATCATGGAAGTGTTGCTTAG 2805 0.5002 MSLLPLFFLLSVVLFQQTFFISALNQDGLYLYQWKQSLDDPDSSLASWKNRDTTPCNWAGVTCGPNTSAVTSLDLSNFNVAGPFSATFLCRLPNLTSIILFNNSINQTLPLQISLCTPLIHLDLSQNLLTGTLPHTLPLLPSLRYLDLTGNNFSGPIPPSFGTFQNLQTLSLVFNLLDDVLPPSLFNITSLKTLNLSYNPFHPSPIPSSLGNLTNLETLWLSACNLVGPIPDSLGNLKSLRVLDLTSNNLYGPIPSSLTRITTVKQIELYNNSLSGELPKGISNLTSLRLFDVSMNHLSGSIPDELCRLPLESLNLYENGFTGELPPSIADSPNLYELKVFGNKLTGKLPDSLGKSAPLRWLDVSTNRFSGGIPTSLCARGELEELLMLGNEFSGEIPASLGSCRSLTRVRLATNRLSGEVPAGMWGLPHVYLLELMDNLFSGSIARTIGGAGNLSSLILTKNNFSGVIPDEIGWLENLQEFSGGDNRFSGSLPGNVVNLGQLGTLDLHNNMLSGELPEGIQSWKKLNDLNLANNMIGGKIPDGIGSLAVLNFLDLSNNQFSGNVPMGLQNLKLNQLNLSYNRLSGNLPPLLSKDMYRDSFIGNPGLCGDFKGLCDGKDGDKGKGFVWILRAIFIVATLVFVIGVVWFFLRYRNFKNAERSVDKSKWTLMSFHKLGFSEDEILNCLDEDNVIGSGSSGKVYKVVLTSGEVVAVKKIWGGVKKEIDSGDVERGQFYQDSAFDAEVETLGKIRHKNIVKLWCCCTTRDSKLLVYEYMPNGSLGDLLHSNKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDATGKGTKSMSVIAGSCGYIAPDEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGTENQTKPAKKDGKLSPYYYDDGSDHGSVA* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02597 934 FunFam Receptor-like protein kinase HSL1 670 774 - -
Phac6g02597 934 SUPERFAMILY Protein kinase-like (PK-like) 681 900 IPR011009 -
Phac6g02597 934 SMART LRR_typ_2 285 309 IPR003591 -
Phac6g02597 934 SMART LRR_typ_2 548 571 IPR003591 -
Phac6g02597 934 SMART LRR_typ_2 140 166 IPR003591 -
Phac6g02597 934 SMART LRR_typ_2 188 213 IPR003591 -
Phac6g02597 934 SMART LRR_typ_2 500 523 IPR003591 -
Phac6g02597 934 SMART LRR_typ_2 237 261 IPR003591 -
Phac6g02597 934 SMART LRR_typ_2 92 116 IPR003591 -
Phac6g02597 934 FunFam Receptor-like protein kinase HSL1 310 617 - -
Phac6g02597 934 ProSiteProfiles Protein kinase domain profile. 686 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02597 934 MobiDBLite consensus disorder prediction 905 934 - -
Phac6g02597 934 FunFam Leucine-rich receptor-like protein kinase family protein 206 305 - -
Phac6g02597 934 Gene3D Phosphorylase Kinase; domain 1 670 774 - -
Phac6g02597 934 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Phac6g02597 934 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 233 903 - -
Phac6g02597 934 Pfam Protein kinase domain 688 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02597 934 Gene3D Ribonuclease Inhibitor 205 310 IPR032675 -
Phac6g02597 934 ProSiteProfiles Leucine-rich repeat profile. 573 595 IPR001611 GO:0005515
Phac6g02597 934 SUPERFAMILY L domain-like 40 394 - -
Phac6g02597 934 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 24 188 - -
Phac6g02597 934 MobiDBLite consensus disorder prediction 909 923 - -
Phac6g02597 934 SMART serkin_6 686 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02597 934 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Phac6g02597 934 Pfam Leucine Rich Repeat 190 213 IPR001611 GO:0005515
Phac6g02597 934 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Phac6g02597 934 Pfam Leucine rich repeat 93 153 IPR001611 GO:0005515
Phac6g02597 934 Gene3D Transferase(Phosphotransferase) domain 1 775 873 - -
Phac6g02597 934 FunFam Os07g0541700 protein 775 864 - -
Phac6g02597 934 Coils Coil 933 934 - -
Phac6g02597 934 Gene3D Ribonuclease Inhibitor 311 617 IPR032675 -
Phac6g02597 934 PRINTS Leucine-rich repeat signature 119 132 - -
Phac6g02597 934 PRINTS Leucine-rich repeat signature 237 250 - -
Phac6g02597 934 SUPERFAMILY L domain-like 311 608 - -
Phac6g02597 934 Gene3D Ribonuclease Inhibitor 24 204 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02597 Phac-Chr6 24002393 24006447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02597 871 934 Receptor kinase-like Gene Family AT1G28440 63.235 2.65e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac6g02597 Pkinase 6.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02597 - - gmx:100776936 1467.98