Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02594 ATGCTCTCTTTTTTCCTTTTCAACTTATCTTCCAACTGTTTGATATCTCCCCATCAAAGTCACATGTATATAAGCTTCTTTCTACACAAACCTCTTTCACAAACCACCCAATCTCACCTTCTTCCTTCAACTATTCCTCCATCTTCACCACCAATAACCCATCTCTACCATACCACAATCACAACAGTGAAGATGAACCATGTGGAGCTTATCGCTTATGACATGGTCATGATCACTCTATCCATATCTCTGATTGTTCTTGGCATCATCCTCTTCCTCGCTTGCAAGAAGAAACCCGTTGAATCCGAAGAAACCCTTCCCGTGAAGCTGTGTGCTCGTGCATACCCCTTGATGGAAGTTGATGCCGCCACCGGTGGCTTCAACCATAGGAGAATCATTGGGCAGGGTCGCTTAGGAACTGTGTATGCAGGGACACTGGAGAAAGAAGAGCTTGTAGCTGTTAAAAGGATTCACCCCGTTCTTGTGTTGAGCAATGCAGGGTTTGGTTTCTCATCCGTGTTGAAATGGCTCTCCTTGGCCCAACACCCCAACGTAGTTCCAATCATAGGGTTCTCAGAAGCACCTGGTGAGAGAGTTATTCTGATGGAGTTTGTGCACATGGCAAGCTTGGACTTCTACTTGCATAAAAACCAAGATGGGGCTTCACTTTTGGATTGGAACAAGAGGTTCAGGATTGCAGCTGGAGCAGCCAGAGGGCTTCAATACCTGCATGAAGTGGTGGCGCCAAACATTGTACACGGGTGTGTCAAGTCCTCTAATATTCTCATTGATGTCAACTTCTGTGCTAGAATTTCTGATTACGGGCTTAACTTTTTGGCACCTGTGGAAAAGAGAGGGCTAGTGGGGTATGTGGATGATGAATATTGGAGTGAAAGAAGGGGTGGTGGAGCTACCAAGGAGAGTGATGTTTATGGGTTAGGGGTGATCCTGCTGGAGCTTTTAACTGGGAAAGGGTGTGAGGGAGGGTTGTTGGTGAAGTGGGCATTGCCTTTGATTAGAGAAACAAGTTTTAGTGAACTTTTGGATCCTAGGTTGGTCATTCCTTCTGACACCAAGCCTCTGGTTAGATTAGCCAAAGTTGCTTCAGCATGTGTTGGTAACTCACGAAAATGTAGACCTTCTGTGGCTCAAGTGGCAACCATTTTGAACAATTTAGAAACTGAAGTGTGCCTCTGA 1197 0.4553 MLSFFLFNLSSNCLISPHQSHMYISFFLHKPLSQTTQSHLLPSTIPPSSPPITHLYHTTITTVKMNHVELIAYDMVMITLSISLIVLGIILFLACKKKPVESEETLPVKLCARAYPLMEVDAATGGFNHRRIIGQGRLGTVYAGTLEKEELVAVKRIHPVLVLSNAGFGFSSVLKWLSLAQHPNVVPIIGFSEAPGERVILMEFVHMASLDFYLHKNQDGASLLDWNKRFRIAAGAARGLQYLHEVVAPNIVHGCVKSSNILIDVNFCARISDYGLNFLAPVEKRGLVGYVDDEYWSERRGGGATKESDVYGLGVILLELLTGKGCEGGLLVKWALPLIRETSFSELLDPRLVIPSDTKPLVRLAKVASACVGNSRKCRPSVAQVATILNNLETEVCL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02594 398 FunFam Receptor protein kinase CRINKLY4 205 396 - -
Phac6g02594 398 FunFam serine/threonine-protein kinase-like protein ACR4 94 204 - -
Phac6g02594 398 SUPERFAMILY Protein kinase-like (PK-like) 105 389 IPR011009 -
Phac6g02594 398 ProSiteProfiles Protein kinase domain profile. 127 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02594 398 Pfam Protein tyrosine and serine/threonine kinase 130 387 IPR001245 GO:0004672|GO:0006468
Phac6g02594 398 Gene3D Transferase(Phosphotransferase) domain 1 206 396 - -
Phac6g02594 398 PANTHER OS01G0253100 PROTEIN 107 393 - -
Phac6g02594 398 Gene3D Phosphorylase Kinase; domain 1 93 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02594 Phac-Chr6 23988628 23990434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02594 112 390 Receptor kinase-like Gene Family AT3G59420 39.249 6.93e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Phac6g02594 PK_Tyr_Ser-Thr 2.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02594 - - var:108342329 655.981