Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02589 ATGGGCTTGATCGATCTGAACACCACCGAGGATGATGAAGCTCCATTATCTGCTTCTTCTTCTTCTGCTGCTTCATCTTCTTCTTCTCACTCGGGGATAAGCACTTCTGCTTCAACCTTGGTTGTTCCTCCTCCGCCTCCCCCTCCTCCTTCCGTGTGCTTGGAACTGTGGCACGCGTGTGCGGGCCCTTTGATCTCTCTGCCGAAGAAAGGAAGTGTGGTTGTGTACTTGCCACAGGGACACTTTGAGCATGTTCAGGATTTTCCGGTCACTGCTTATGATATCCCACCCCATGTGTTCTGTCGTGTTCTTGATGTCAAGCTCCATGCAGAGGAAGGGAGCGATGAAGTATATTGCCAAGTGTTGTTGGTTCCTGAAAGCGAGCAACTGGAGCAAAGTTTGCGTGAAGGCGAAATTGAAGCTGATGGGGAAGAGGGGGACACAGAAGCTATGGTGAAGTCAACAACTCCCCATATGTTCTGCAAGACTCTCACAGCTTCAGACACCAGCACTCATGGTGGATTTTCAGTGCCTCGCCGAGCAGCTGAAGATTGCTTTCCTCCCCTGGATTACAGTCAACAGAGACCTTCACAGGAGCTCGTGGCAAAGGATCTTCATGGACTGGAATGGAGGTTTCGTCATATATACAGGGGTCAACCACGGAGGCATTTGCTAACTACTGGGTGGAGTGCATTTGTGAACAAAAAGAAGCTTGTTTCTGGAGATGCTGTGTTGTTTCTTAGGGGCGATGATGGAGAACTGAGATTAGGGATTCGTAGGGCAGCCCAATTGAAAGGTTCTGGTTCCTTTGCAGTTCCCTCTGGTCAGCAATTGAATCCTGGAAGTTTCATGGATGTTGTTAATGCATTATCTACAAGATGTGCTTTTAGTGTTTGCTACAATCCAAGGTTTAGCTCTTCGGAATTCATCATACCTGCTCACAAATTCTTAAAGAGTCTTGACAATTCTTATTTAGTTGGGATGAGGTTCCGGATGCGCTTCGAAACCGAAGATGCTGCAGAGCGGAGATTTACTGGATTAATTGCTGGAATCAGTGATGTCGATCCTGTTAGGTGGCCTGGATCAAAATGGAGATGCCTACTGGTAAGGTGGGATGACATGGAAGCTGCTAGGCACAATAGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTGCTTCAAGTTCCAGCAACATGATGGCAGCTGGTTTGAAGAGGACCAGGATTGGAATGAATTCAACGAAGATGGAATTTCCTTCTCCCAATGGGATTGGAACATCAGACTTTGGGGAATCATTAAGGTTCCGGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATCCTCCGTTTGATGGTATTAATGCTCCGAGTCCTCGGTTATATGACTTAGGGAGGTACTATCTTGGTCCAAACTGTTCTGGGATTCCTCCTACAGGAAATAACATCAGAATGCCACATGCAGCATCTGATTTTTCCTGCAATGGCACAGGCTTTAGTGAATCTTTCGGGTTCCAAAAGGTCTTGCAAGGTCAAGAAATTCTTCCAAGCCAACCATATGGAAGATCATTGTCATTCGAGGAGGCTCGAGCTAATGGTCGCTTTGGACATTTTGATGGTTATCAGTTGCTTAACTCCAGAAATGGGTGGTCTGTACAGATGCATGACAATGCTCCACATTTGCATGCATCCGTTACACCTTCACAAGTGTCATCTCCATCATCTGTGTTAATGTTCCAGCAAGCAGTTAGTCCAGTTTCCAACTGTGATTATAATAATAAGAAACATAGTAAGATGTACCAAGGTTTATGCGCTTCTGAAGTGAAAGCTAGAACATTTGCATCTTCCCCATCTGATGATCTTACTTTCTCTAGGCGAGCTCCGGAAAGGGCTAGTTCTTTAGGTATGTTTGATGTTCATAATCAGTTGGGTAGTTCACAGTCACACAATTCTGTGTCAGCATTGAGAAACAATCAAGAGTTGGTTTCGTCATGTAAAAGCAGTTGTAGACTTTTTGGTTTTTCATTGACTGAGGACGCACATGTTGCAAATAAAGAGGTTGATGCCTCTGCCATCACTTTACCATTGAATGCTGGACCTTCCTTTACTAGACTTGTTGAAGATGAGTTCCATCCCAGCCGGGCACTTCAGAGCAAGGCAGTTGGAAGTAACTGCACAAAGGGTGTGTTGCAGTATTGA 2199 0.4552 MGLIDLNTTEDDEAPLSASSSSAASSSSSHSGISTSASTLVVPPPPPPPPSVCLELWHACAGPLISLPKKGSVVVYLPQGHFEHVQDFPVTAYDIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPESEQLEQSLREGEIEADGEEGDTEAMVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKGSGSFAVPSGQQLNPGSFMDVVNALSTRCAFSVCYNPRFSSSEFIIPAHKFLKSLDNSYLVGMRFRMRFETEDAAERRFTGLIAGISDVDPVRWPGSKWRCLLVRWDDMEAARHNRVSPWEIEPSGSASSSSNMMAAGLKRTRIGMNSTKMEFPSPNGIGTSDFGESLRFRKVLQGQEILGVNPPFDGINAPSPRLYDLGRYYLGPNCSGIPPTGNNIRMPHAASDFSCNGTGFSESFGFQKVLQGQEILPSQPYGRSLSFEEARANGRFGHFDGYQLLNSRNGWSVQMHDNAPHLHASVTPSQVSSPSSVLMFQQAVSPVSNCDYNNKKHSKMYQGLCASEVKARTFASSPSDDLTFSRRAPERASSLGMFDVHNQLGSSQSHNSVSALRNNQELVSSCKSSCRLFGFSLTEDAHVANKEVDASAITLPLNAGPSFTRLVEDEFHPSRALQSKAVGSNCTKGVLQY* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02589 732 Gene3D - 158 262 IPR015300 -
Phac6g02589 732 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 51 683 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac6g02589 732 Pfam B3 DNA binding domain 160 261 IPR003340 GO:0003677
Phac6g02589 732 ProSiteProfiles B3 DNA-binding domain profile. 160 262 IPR003340 GO:0003677
Phac6g02589 732 SMART B3_2 160 262 IPR003340 GO:0003677
Phac6g02589 732 CDD B3_DNA 158 260 IPR003340 GO:0003677
Phac6g02589 732 FunFam Auxin response factor 158 262 - -
Phac6g02589 732 FunFam Auxin response factor 323 394 - -
Phac6g02589 732 Gene3D - 324 397 - -
Phac6g02589 732 SUPERFAMILY DNA-binding pseudobarrel domain 153 267 IPR015300 -
Phac6g02589 732 MobiDBLite consensus disorder prediction 12 39 - -
Phac6g02589 732 MobiDBLite consensus disorder prediction 1 45 - -
Phac6g02589 732 Pfam Auxin response factor 287 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02589 Phac-Chr6 23938437 23945082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02589 159 517 B3 DNA Binding Superfamily AT2G33860 60.833 3.78e-148 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac6g02589 B3 3.6e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02589 K14486 - gmx:100789906 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02589 6 23938437 23945082 Phac6g02589 6 23938437 23945082 ECH