Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02574 ATGGCTTCTTCTAACAGACACTGGCCGAGCATGTTCAAGTCTAAGCCCTGCAACCCTCACCACCAATGGCAGCATGACATCAACTCCTCCCTCATCTCAACTGCTTGCCACAGAAGCCCTTACACTTCAGGTACGGGTTGTGAAGAGAGAAGTCCAGAACCAAAGCCAAGGTGGAATCCAAAACCTGAGCAAATTCGCATTCTGGAAGCTATATTCAACTCAGGAATGGTGAATCCTCCTAGAGATGAGATAAGAAAGATAAGGGCACAGTTGCAAGAGTATGGCCAAGTGGGTGATGCAAATGTCTTCTATTGGTTTCAGAACCGCAAATCAAGGAGCAAACACAAGCTTCGTCATCTCCAAAACTCAAAGAACCAGAACCTTGAAAATCAACAAAACCCCACTTCTCTCCCTCAAATCACTGCACCATCATCCTCATCTTCCTCCTCTGAGAAATCTTCTCCAAAAGAATTAATACCAACCAAGGTATTCTCCATTGGATTCTCTAACGTCACCGATGTGGTACCTAATTCTCCAACTACTTCTGTGAACCAGACCTATTTTCAGACTCACAATGAGTCTTCTATGCTTCCACCACCACCACCTGCTGCTGCCCCACACACTGGGGCTTTCTTCTTCCCAGTGCAACATCATGCGCAGGGAGGAGCACCTAGTACGGTGGCATCACAAGGGTTTTGTTTCTCGGAGCTGTCTAATGTTGTTCAACTTCAATCACCTCCTCAACATAACATTGGTCCTTGCACTAGCCTCTTGCTCAGTGAAATCGTAGGCCATGGTGCTGCTGCATCAAAGAAAGATCTAGAGCAAGACAAGAGTCTGAAAATAATGCACCAGCCCTCACTGTTTAATTTCTGTGTCACTCCCACGACAACAGCTCCTACTTCTGCCTCCGCTGTACCTCCCATCACTACCTCAACCACTACTGTTCTATCCCCCGTCATTGCTCAAGTTCATGGCATGGGAGATCCAGCTGCTGCGGCGAGATCAACGGTGTTCATTAACGATGTGGCATTCGAGGTAGCGGTGGGACCTTTCAATGTGCGTGAAGCTTTTGGAGATGATGCTGTGCTCATCCATGCCACTGGTCAACCTGTGCTAACAAACCAATGGGGTGTCACTCTTCATTCACTCCAGCATGGTGCATGTTATTATTTGATATAG 1182 0.4712 MASSNRHWPSMFKSKPCNPHHQWQHDINSSLISTACHRSPYTSGTGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSKNQNLENQQNPTSLPQITAPSSSSSSSEKSSPKELIPTKVFSIGFSNVTDVVPNSPTTSVNQTYFQTHNESSMLPPPPPAAAPHTGAFFFPVQHHAQGGAPSTVASQGFCFSELSNVVQLQSPPQHNIGPCTSLLLSEIVGHGAAASKKDLEQDKSLKIMHQPSLFNFCVTPTTTAPTSASAVPPITTSTTTVLSPVIAQVHGMGDPAAAARSTVFINDVAFEVAVGPFNVREAFGDDAVLIHATGQPVLTNQWGVTLHSLQHGACYYLI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02574 393 SMART HOX_1 53 120 IPR001356 GO:0003677
Phac6g02574 393 MobiDBLite consensus disorder prediction 41 62 - -
Phac6g02574 393 CDD homeodomain 54 116 IPR001356 GO:0003677
Phac6g02574 393 FunFam WUSCHEL-related homeobox 11 55 122 - -
Phac6g02574 393 Gene3D - 55 121 - -
Phac6g02574 393 MobiDBLite consensus disorder prediction 124 156 - -
Phac6g02574 393 SUPERFAMILY Homeodomain-like 51 119 IPR009057 -
Phac6g02574 393 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
Phac6g02574 393 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 393 IPR044557 GO:0003700|GO:0050793
Phac6g02574 393 Pfam Homeodomain 55 115 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02574 Phac-Chr6 23853239 23856464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02574 1 393 Wox Gene Family AT2G33880 47.743 5.25e-91 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac6g02574 Homeodomain 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02574 - - pvu:PHAVU_006G179900g 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02574 6 23853239 23856464 Phac6g02574 6 23853239 23856464 ECH