Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02572 ATGGATATTCGTAGTAATCATGTTGCAACTTCTGAAGGGATTCTTGAGAATGTATGGGCCAAAATTATGAGCAGTGATAAAGCAGGTGGAAGAAAAGGTGATGCAGCAGAATCTTCTAACTCTTGGGAAGAACTTCCTAACCTTGATGGTAGAGAAGGGTCCATGGAAATTCTACAAAGACTTCCAAGTTTAGGGAGGTGGATATCAATGGGAGCTGATTTCTGGGAAGAAGTTTTAGATGGTATTGCTCTACCTAACACAAGCAATACAGAATATTCTAGCAATAACAATATGGAAAGTGGAAGTGGTGGCGAATGTAATAGCAAGGTGGAAGATGCTGTGAGAATAGAGAAGGAAGTTACAAAACACTACAGAGGAGTTAGGAGAAGGCCTTGGGGTAAATATGCTGCAGAGATTAGAGACTCATCCAAGAAAGGTGCTAGAGTTTGGCTTGGAACATTTGACACGGCTGAAGAAGCTGCTTTGGCATATGACAAGGCTGCTTTGAGGATTAGGGGTCCAAAGGCATACCTTAATTTCCCACTTGAGAGGGTTGCAAAGGCTTTAGGATGTGACAGCAAAGGAACTCATCTTACTTGCAGGAGCATAGGTAACAGAGAAAAAATGATCAACTCTAGGAAGAGGGGATCAAGGGAAAGGGAAGTGTTTGATGATGATATGATGAATGAAGAACCAGCAAGAAAAAAGTTGGAATGCATGGTAGAAAATGAAATAGGTGTTTTTGTATTTCAGGACCTAGGAAAGGATTACTTGGACAGTTTGCTGTCTTCTTTTTGA 798 0.4098 MDIRSNHVATSEGILENVWAKIMSSDKAGGRKGDAAESSNSWEELPNLDGREGSMEILQRLPSLGRWISMGADFWEEVLDGIALPNTSNTEYSSNNNMESGSGGECNSKVEDAVRIEKEVTKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLERVAKALGCDSKGTHLTCRSIGNREKMINSRKRGSREREVFDDDMMNEEPARKKLECMVENEIGVFVFQDLGKDYLDSLLSSF* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02572 265 PANTHER DNA-BINDING DOMAIN 99 229 IPR044808 GO:0003700|GO:0009873
Phac6g02572 265 ProSiteProfiles AP2/ERF domain profile. 123 181 IPR001471 GO:0003700|GO:0006355
Phac6g02572 265 Gene3D AP2/ERF domain 122 183 IPR036955 GO:0003700|GO:0006355
Phac6g02572 265 MobiDBLite consensus disorder prediction 27 48 - -
Phac6g02572 265 CDD AP2 122 181 IPR001471 GO:0003700|GO:0006355
Phac6g02572 265 Pfam AP2 domain 123 173 IPR001471 GO:0003700|GO:0006355
Phac6g02572 265 SMART rav1_2 123 187 IPR001471 GO:0003700|GO:0006355
Phac6g02572 265 FunFam Ethylene-responsive transcription factor 2 122 183 - -
Phac6g02572 265 SUPERFAMILY DNA-binding domain 123 182 IPR016177 GO:0003677
Phac6g02572 265 PRINTS Ethylene responsive element binding protein signature 124 135 IPR001471 GO:0003700|GO:0006355
Phac6g02572 265 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02572 Phac-Chr6 23834060 23835363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02572 14 265 AP2-EREBP Transcription Factor Family AT4G18450 38.235 1.78e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac6g02572 AP2 3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02572 - - gmx:100820226 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02572 6 23834060 23835363 Phac6g02572 6 23834060 23835363 ECH