Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02566 ATGCATTTCCTTTCAACTAATCCTCAAGCACAAACAATGACTTTGCTCATCTTTTATTTTCTCATGTCCCTTGTTCTTATTAAGGGCTACCAAGATGAAGCTACAAATGTACACAACCAAGTTATATCTGTTGGGGCAATCATAGATGTGAATTCTCGCATTGGGAAAGAACAGCAAGTAGCCATGGACATTGCAGCTCGAAGTTACAACAGCACTTCAAAGGCCTACAAGTTGGCTCTCTATTTTCGGAACTCCACCAAGGATCCCATCCGAGCCATCACTCTTGCTGAAGAGATGATTAATAAGCAAAAGGTGCAAGTGATTATTGGGATGCACAGATGGTCAGAAGCAGCTCTAGTGGCTGAAACAGGAAGCCAAGCTCAAGTTCCTATCATAGCATTTGCAGAACCCACCATAACCCCACCGTTGATGACTAAGCGGTGGCCTTTTTTGGTGAGAATGACTAGAAGTGGTTTATCGTATATCAAATGCATTGCAGATATAGTGAAAGCTTTTGGATGGCAGAGAGTAGTAGCTATCTATGAAGATGATGCATATGGAGGTGATTATGGCATGCTAGCACTACTATCTGAGGCCCTCCAGAATGTGAGTTCATTGATTGATTATCACTTGGTTCTTCCACCTATTTCTTCTCTGCATGATCCAGGAGGGTTTATTCGTGAAGAGCTGTTGAAGTTGGTGCAAACCCAATCTCGCGTGTTCATTGTGCTACAATCTTCATTAGAAATGGCTATCCATTTGTTTAAAGAAGCCTCAAAAATGGGACTGGTGGACAAAGAATCAGCTTGGATACTCCCAGAGAGCATAACAAATTTGCTGGACTCTGTCAACAAGTCTGCTATTTCCTATATGGATGGAGCTTTAGGAATCAAGACGTACTACTCCGAAATAAGCAGTGAGTACCAAGATTTTGAGGCTCAATTCAGGAGAACATTTTGGTCTAAGAATGTGGAGGAAGATAACCTCTACCCCGGATTTTATGCATTGCAAGCATATGATAGCATTAAAATTGTGACCCAAGCAGTGGACAGAATGACCAGTAGAAACACTACCAGCCCAAAGAATTTACTACGAGAAATACTGTCTACCAGTTTTCTTGGTTTAAGCGGTCATATTCAATTTGAAGATGGGGCACTCCAGAAGACTTCTATTTTAAGGATAGTAAATGTGGCTGGGAAGAGTTACAAGGAACTATGCTTTTGGAGTGAACAATATGGGTTCATCACAAACATCCCTACAGGAAAAGGTGGATATTCTGGTGCTGGTAATACAGAATGTTTCAGTGGTGTTCGGTGGCCTGGGAATGTGAAGCACTATCCAAAAGGGTGGAACATGCCTACTGCACAGAATCCAATGAAAATTGCAGTCCGCAGCAGAACCTCTTTTTCCAAGTTTGTCAAGGTTGATTATGATCATAATGGTAATCCTGCAAGTTTTAGTGGATTTTGTATTGACATTTTTAAGAGTGTGCACGACCTTTTGGGGTATGACTTGCCATATGAGTATTATCCTATTGATGGAACCTATAATGATTTGGTTCAGCTTGTCTATAACAAGAGTTATGATGCCGCAGTCGGGGACATGACAATACTAGAGGAAAGACTGCAGTATGTGGATTTTACAGTGCCATATGCAGAATCAGGATTGTCAATGATAGTTCCATCGAAGTCTAAAGAGTCAGCATGGATGTTCACAAAGCCCTTTACCTGGGAACTGTGGCTGGTTACAGGTTCCATTTTGATTTACACAATGTTAGTAGTTTGGTACCTTGAGAGAGAATCCAATCCTGAATTTCATGGCAATTGGAAGACCCAAATCAGCACAGCTCTTTGGTTTACCTTCTCCTCTTTGTTTTTCGCTCACAGGGAAAAAATGCATAGCAACTTAACTCGCATGGTGATGGTCTCATGGCTCTTGCTAGTTCTGATCCTTACCTCATGCTACACTGCCAGTCTTTCTTCAATGCTCACAGTTAAAAAACTGCAACCAAATGTCACAGATATTGAGTGGTTGAAGAGGAACAACATGAAAATTGGTTGTGATGGCGACTCATTTGTTAGGTCGTTCCTAGAGAAAGTAGAATGGTTCCATCCTGAGAACATAATCCATGTTACTGATGAATACAAGTATGATGATGCTTTTCAAAATAACACCATAGCAGCTGCCTTTCTTGAACTCCCATATGAAAAGGTATTCATTACTGAATACTGCGATAGATACACGGGTTCCACCCCCAGAACCAGATTTGGAGGACTGGGCTTTATGTTCCAGAAAGGCTCACCAGTGACCAGAGACGTGTCAAAAGCTATATTACATCTGTCAGAAAAGGCAGAGCTGAAGAGGTTGGAAGAGAAGTGGTTGATTACCTCCAGCAAGTGCTCCTCCGACACCAACAATACGGAAAGTTTGAAGCTGAGAAGTTTATGGATTCTATATGTCATCTCTGGTGCTACTTCCACCATTTGTCTGCTACTATCAATCATCCACACTCTAGTAAAATCCTGTCAGCAATGCCAACGCGTGGCAGCAGAAGGCAATGACACCCCAAGTCATCATAATGCGTGGGAAAAGATGATTACACATGTAAATCACACTTTTAACAAAAAGATCAATAATTCAAGAGAGACACAGACACAGGTTGTAACTGATTTTTCTTCCAGACGGGGTCACCAGAGCATGAATGATTCTCATGAGCATCATCTGGAATTGGCTTCTCTAGCACCTCAAAGTTCAATGCTCCCTTCTCCATCACCAGAGCTACACATGACAACACACGCAGACATAGGAATCACCAACACTTCAAAGTAG 2829 0.4175 MHFLSTNPQAQTMTLLIFYFLMSLVLIKGYQDEATNVHNQVISVGAIIDVNSRIGKEQQVAMDIAARSYNSTSKAYKLALYFRNSTKDPIRAITLAEEMINKQKVQVIIGMHRWSEAALVAETGSQAQVPIIAFAEPTITPPLMTKRWPFLVRMTRSGLSYIKCIADIVKAFGWQRVVAIYEDDAYGGDYGMLALLSEALQNVSSLIDYHLVLPPISSLHDPGGFIREELLKLVQTQSRVFIVLQSSLEMAIHLFKEASKMGLVDKESAWILPESITNLLDSVNKSAISYMDGALGIKTYYSEISSEYQDFEAQFRRTFWSKNVEEDNLYPGFYALQAYDSIKIVTQAVDRMTSRNTTSPKNLLREILSTSFLGLSGHIQFEDGALQKTSILRIVNVAGKSYKELCFWSEQYGFITNIPTGKGGYSGAGNTECFSGVRWPGNVKHYPKGWNMPTAQNPMKIAVRSRTSFSKFVKVDYDHNGNPASFSGFCIDIFKSVHDLLGYDLPYEYYPIDGTYNDLVQLVYNKSYDAAVGDMTILEERLQYVDFTVPYAESGLSMIVPSKSKESAWMFTKPFTWELWLVTGSILIYTMLVVWYLERESNPEFHGNWKTQISTALWFTFSSLFFAHREKMHSNLTRMVMVSWLLLVLILTSCYTASLSSMLTVKKLQPNVTDIEWLKRNNMKIGCDGDSFVRSFLEKVEWFHPENIIHVTDEYKYDDAFQNNTIAAAFLELPYEKVFITEYCDRYTGSTPRTRFGGLGFMFQKGSPVTRDVSKAILHLSEKAELKRLEEKWLITSSKCSSDTNNTESLKLRSLWILYVISGATSTICLLLSIIHTLVKSCQQCQRVAAEGNDTPSHHNAWEKMITHVNHTFNKKINNSRETQTQVVTDFSSRRGHQSMNDSHEHHLELASLAPQSSMLPSPSPELHMTTHADIGITNTSK* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02566 942 Gene3D - 453 567 - -
Phac6g02566 942 Gene3D - 728 801 - -
Phac6g02566 942 FunFam Glutamate receptor 161 329 - -
Phac6g02566 942 Gene3D - 568 700 - -
Phac6g02566 942 FunFam Glutamate receptor 458 569 - -
Phac6g02566 942 Pfam Bacterial extracellular solute-binding proteins, family 3 484 794 IPR001638 -
Phac6g02566 942 Gene3D - 36 161 - -
Phac6g02566 942 Pfam Receptor family ligand binding region 59 396 IPR001828 -
Phac6g02566 942 Gene3D - 162 340 - -
Phac6g02566 942 CDD PBP1_GABAb_receptor_plant 43 414 IPR044440 -
Phac6g02566 942 MobiDBLite consensus disorder prediction 916 942 - -
Phac6g02566 942 Pfam Ligand-gated ion channel 795 823 IPR001320 GO:0015276|GO:0016020
Phac6g02566 942 PIRSF IGluLR_plant 9 923 IPR017103 -
Phac6g02566 942 SMART GluR_14 460 796 IPR001320 GO:0015276|GO:0016020
Phac6g02566 942 SUPERFAMILY Periplasmic binding protein-like I 38 450 IPR028082 -
Phac6g02566 942 CDD GluR_Plant 457 794 - -
Phac6g02566 942 FunFam Glutamate receptor 568 698 - -
Phac6g02566 942 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 873 IPR015683 -
Phac6g02566 942 SUPERFAMILY Periplasmic binding protein-like II 437 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02566 Phac-Chr6 23800562 23804500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02566 7 838 Ion Channels AT2G29120 32.949 3.76e-145 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02566 - - gmx:100818619 1525.76