Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02530 ATGTCAACCCCTTCATCATCTTCTTCTATTTGGGTGTTGTCTAACATAAAGCTTCAGTTCTTTGCCCGCATCAGACGGTTTCTCCAATCCAAAGCAACGAGAAAGCGTTTTGATCCCTCCGATCGGTTTGACACGGCTAAGAGCAGAGGTGAACACAACAAGAAGGCTGAAAATCTTGAAACAGTACAGGTTATGGAGAAGCCTGAAGAGGAGGAGGAAGAAGAAGTTTCTGCGATCATGTTCCAGAGAACTGTGAAGATGCTTCACTTTGGAAGCTGGGAAGATAAGGAAGTGGCAGCAAAGGAGATTGAGAAGTTAGCCAAGGAAGATGTTAAGGTCAGAAAGTTGATAACAGAACTTGGGGTGGTGCCGGTGTTGGTATCTATGGCTGCGTCGCCAGTGGCTAGCCGCCAGCGAGCCGGGTTGACGGCGTTGATCCACCTGGCTGATGGTACTTACACGAACAAGGCTTTGATCGTGGAGGCAGGAATATTGTCCAAGCTGCCAAAGACAATTGACCTTGTAGATGAATCAACAAGAAGTAAATTGGCAGAGTTGCTTCTGTCACTGTCATCTCTAGCAAACACTCAGTTCCCTCTTGCTTCATTAGACTTTCTCCCATTACTTAAACACATTTTTGAGACAGACACCTGTTTTGACACCAAACAATCGTGTTTGGGTGCTTTGTATAACCTATCAACTGTATTAGAGAATGCATCCCCTATGGTTTCAAGTGGGGTGGTCCCTATCCTCTTGGAAGTGTCCTCATTAAAAGAAATTTCAGAGAAAGCACTTGCCACTCTAGGGAACTTGTCCGTGACTTTGATGGGGAAAAAAGCAATAGAGAACAGCACAATGGTCCCAGAAACCTTTATTGATATCTTGTCATGGGAAGATAAGCCTAAATGCCAAGAGTTATCGGTGTATATTTTAATGATTCTAGCACATCAAAGCTCACTGCAAAGAAAGAAAATGGTAGAGGCAGGGCTTGTTCCTGTGCTTCTTGAATTGGTTTTATTGGGCAGCCCTTTAGCTCAAAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAAAGGCAAACTAAGATGGGGCCACATTCTGGTCCACAAACACCAAGATTTGCAATGGGGTCACCTGTAAATCAAAGAGAAGCAAAAGAAGGGAAGAGAATGATGAAGAGTTTGGTGAAACAAAGTTTGCACAGGAATATGGAAATGATAACTAACAGAGCAAATGCTGCAGGGGAGTCTTCTAAATTGAAGTCTTTGATTATCAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1308 0.4327 MSTPSSSSSIWVLSNIKLQFFARIRRFLQSKATRKRFDPSDRFDTAKSRGEHNKKAENLETVQVMEKPEEEEEEEVSAIMFQRTVKMLHFGSWEDKEVAAKEIEKLAKEDVKVRKLITELGVVPVLVSMAASPVASRQRAGLTALIHLADGTYTNKALIVEAGILSKLPKTIDLVDESTRSKLAELLLSLSSLANTQFPLASLDFLPLLKHIFETDTCFDTKQSCLGALYNLSTVLENASPMVSSGVVPILLEVSSLKEISEKALATLGNLSVTLMGKKAIENSTMVPETFIDILSWEDKPKCQELSVYILMILAHQSSLQRKKMVEAGLVPVLLELVLLGSPLAQKRAMKLLQWFKDERQTKMGPHSGPQTPRFAMGSPVNQREAKEGKRMMKSLVKQSLHRNMEMITNRANAAGESSKLKSLIISTSSKSLPY* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02530 435 Gene3D - 55 407 IPR011989 -
Phac6g02530 435 SMART arm_5 152 192 IPR000225 GO:0005515
Phac6g02530 435 SMART arm_5 110 150 IPR000225 GO:0005515
Phac6g02530 435 SMART arm_5 234 273 IPR000225 GO:0005515
Phac6g02530 435 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 10 435 - -
Phac6g02530 435 MobiDBLite consensus disorder prediction 36 55 - -
Phac6g02530 435 SUPERFAMILY ARM repeat 85 356 IPR016024 -
Phac6g02530 435 MobiDBLite consensus disorder prediction 362 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02530 Phac-Chr6 23587045 23590138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02530 94 373 U-box Gene Family AT1G67530 29.965 5.19e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02530 - - gmx:100813828 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02530 6 23587045 23590138 Phac6g02530 6 23587045 23590138 ECH