Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02519 ATGCCCGACTTCAACGACTCCATCGCGCCGCCGTCGCGCCCCGTTCCCGTCCGCGAGGACTGCTGGTCTGAGGAGGCTTCTTCGACGCTCGTCGACGCCTGGGGCCGACGCTACCTCGAACTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTCGCCGACGCCGTCAACGCGCTCCACGGCCACACCAAGAAGACGCACCGCACAGACGTCCAGTGCAAGAATCGCATCGACACCATAAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGTCCTCCAATGGTACTCTCTCTTCCTCCTGGCCTTTCTACGAACGATTGGATGCTCTGATTGGCCCTAATTTCAACGCCAAGAAACCTCCTTCCTCCTCGCCGTCTCCTTCGCCGCCTGTGGCTCTTCCGCTGCTGCCGCATCGGAAGAACCTTTCTTCCTCGCCTGCAATTGCGGTGACACCGACGGCCGTCGCGCTTCCCCAGAAGCGCTCCGCCGCTGCGGCGGCGATGGACGAGGGTTACTTCAGAAGGAATTACTCCGCTGTGGCTGCGGCTGCGGCGGCGGCGGAGGCTGATGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGCGGACGATTTGGAGGAGGAGGAGGAGGAAGATGAAGGGAGGGGGAGCGAGGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGAGAAGTGTATGAGAGAGTGGAGGGACAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAATTTGCTAAAGATCTTGAAGTCCAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGGGAAACGATCTGGCTCTAACGGTAGGTACTGGTGGAGTCTGGCAAGAAGCTGCATCTATTATTTGCTCTGTTCAAATCTTCAAGAAAGGTGCAACTACAGGCACGCGAACATGTCCCAGACTTTCTATCTATGTGAAGTGAACCGGATTTTGTAA 1026 0.5712 MPDFNDSIAPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGTLSSSWPFYERLDALIGPNFNAKKPPSSSPSPSPPVALPLLPHRKNLSSSPAIAVTPTAVALPQKRSAAAAAMDEGYFRRNYSAVAAAAAAAEADEEEEEEEEEEADDLEEEEEEDEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNGRYWWSLARSCIYYLLCSNLQERCNYRHANMSQTFYLCEVNRIL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02519 341 Coils Coil 182 217 - -
Phac6g02519 341 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 292 IPR044823 -
Phac6g02519 341 MobiDBLite consensus disorder prediction 190 220 - -
Phac6g02519 341 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Phac6g02519 341 Gene3D - 22 88 - -
Phac6g02519 341 MobiDBLite consensus disorder prediction 1 20 - -
Phac6g02519 341 MobiDBLite consensus disorder prediction 187 230 - -
Phac6g02519 341 FunFam trihelix transcription factor ASIL2 22 88 - -
Phac6g02519 341 MobiDBLite consensus disorder prediction 123 137 - -
Phac6g02519 341 MobiDBLite consensus disorder prediction 118 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02519 Phac-Chr6 23522395 23526431 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02519 18 297 Trihelix Transcription Factor Family AT3G14180 34.571 8.20e-51 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac6g02519 Myb_DNA-bind_4 7.3e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02519 - - gmx:100815241 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02519 6 23522395 23526431 Phac6g02519 6 23522395 23526431 ECH