Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02518 ATGCCCGACTTCAACGACTCCATCGCGCCGCCGTCGCGCCCCGTTCCCGTCCGCGAGGACTGCTGGTCTGAGGAGGCTTCTTCGACGCTCGTCGACGCCTGGGGCCGACGCTACCTCGAACTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTCGCCGACGCCGTCAACGCGCTCCACGGCCACACCAAGAAGACGCACCGCACAGACGTCCAGTGCAAGAATCGCATCGACACCATAAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGTCCTCCAATGGTACTCTCTCTTCCTCCTGGCCTTTCTACGAACGATTGGATGCTCTGATTGGCCCTAATTTCAACGCCAAGAAACCTCCTTCCTCCTCGCCGTCTCCTTCGCCGCCTGTGGCTCTTCCGCTGCTGCCGCATCGGAAGAACCTTTCTTCCTCGCCTGCAATTGCGGTGACACCGACGGCCGTCGCGCTTCCCCAGAAGCGCTCCGCCGCTGCGGCGGCGATGGACGAGGGTTACTTCAGAAGGAATTACTCCGCTGTGGCTGCGGCTGCGGCGGCGGCGGAGGCTGATGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGCGGACGATTTGGAGGAGGAGGAGGAGGAAGATGAAGGGAGGGGGAGCGAGGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGAGAAGTGTATGAGAGAGTGGAGGGACAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAATTTGCTAAAGATCTTGAAGTCCAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGGGAAACGATCTGGCTCTAACGGTGAGATACAATTTCTTTCTGCCTTTTTTCTCCTTTTGGCTTGA 936 0.5812 MPDFNDSIAPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGTLSSSWPFYERLDALIGPNFNAKKPPSSSPSPSPPVALPLLPHRKNLSSSPAIAVTPTAVALPQKRSAAAAAMDEGYFRRNYSAVAAAAAAAEADEEEEEEEEEEADDLEEEEEEDEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNGEIQFLSAFFLLLA* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02518 311 Coils Coil 182 217 - -
Phac6g02518 311 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 292 IPR044823 -
Phac6g02518 311 MobiDBLite consensus disorder prediction 187 231 - -
Phac6g02518 311 MobiDBLite consensus disorder prediction 190 220 - -
Phac6g02518 311 MobiDBLite consensus disorder prediction 1 20 - -
Phac6g02518 311 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Phac6g02518 311 Gene3D - 22 88 - -
Phac6g02518 311 MobiDBLite consensus disorder prediction 123 137 - -
Phac6g02518 311 FunFam trihelix transcription factor ASIL2 22 88 - -
Phac6g02518 311 MobiDBLite consensus disorder prediction 118 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02518 Phac-Chr6 23522395 23526431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02518 18 297 Trihelix Transcription Factor Family AT3G14180 34.571 1.79e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac6g02518 Myb_DNA-bind_4 6.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02518 - - gmx:100815241 450.669