Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02502 ATGGAACAAAGAAGGAACACATTTGGATTTTGTCTAAGAATTTATATTTGCTTGATCTCAGTGTGGGGAATCCGAGATTGTTGGTCCGTTAATGATGAAGGACTGGCTTTGTTAGCGTTCCAAGCGAGAATAACTTTTGATCCCTTTAATGCTTTGGTGAATTGGAATCCCAATGATTGTGACCCTTGCATGTGGTTCGGTGTTCATTGTGTAGATGGTAAAGTGCAAGTCTTGGAGTTAAAAGGGTTATCATTGGAAGGGACATTGGCTCCTGAGCTTGGCAAACTTAGTCACCTAAATTCTATTGTACTATGCAAGAATAACTTTTCTGGTGCCATTCCCAAAGAACTTGGAGATTTACGCAAGCTAGAGTTATTAGATTTAAGGGGAAATAATTTGTCAGGAAACATCCCGGAAGAAATTGGCAACATGTCATTATTAGAACACTTGTTGCTTTGTGACAATAAAATCGAAGGCGATGGTGATCCTCAAGATGGGGGAAAATTAAAATTTCCTTCGAAATCTCTACTTGTTGAAAGTTGTTCATCACCTCTGAGTACTCTAATTTCCTGCATCAATAGGAAATTTGGACACTGTGTGTGGCAACGGAACTTCAAGCAATGGTACAAATCAGATTCATTGATTATTCTAACCAAAGCAACACTTACGAAATTTGCCAATAATGCCTTTGCTTGGCCACTATTCAAGCTAGGGAAGAGTGCCTCTCATGGCCATAAAGAGGATTATTGTGACATTCTGCCTAGTTCTAATGTGCCAAAGATAGCCCGAAATGTACCAGAGTTTGTTTGTTCTGCACGTCGTAAGTTACTTCAGTCTAGTGGTAATAACCTTGCAGCTGCACCTTTCAGTGACAAACCAACAATAGAGTTTAGTTCTGCTCCAACTACCTTCAGTAGTGGAGCTTTTCCTGCTTTCCCAGATCCTCATTCTGATGCTCCTGATGATGCTTCTGATGATGCTTCTGATGAAAATCAATCAGACAATACTTTCGATGGAAATCAAACAAATCAACATGTAAATAAAGGTGCTTATAGAAAAATGTGGAAGATTATAATTAGTATTATTCTTCTTGTGCTGGTCATTATTATCATAACTCTTATGTACATTTGGCGAAAACGAGCTGCAAGAGTAATAGGCCCCTGGAAGACAGGAATAAGTGGACAGTTGCAGAGAGCATTTATAACAGGGGTCCCCAAGTTGAATAGAGCAGAGTTAGAGACAGCCTGTGAAGATTTTAGCAATATTGTTGTTAATAGTTATGAAGGGTGCACCATCTACAAAGGAACATTGTCCAGTGGAGTTGAGATTGCTGTAGTTTCTACTCTAATTACTTCTTCTAAAAATTGGTCAAAGAGCATGGAGAGGCAATACCGCAAAAAGATTGATACTTTGTCTCGCATAAATCATAAGAACTTTATTAATCTTATTGGGTACTGCGAAGAAGAAGAGCCATTCACTAGGATGTTGGTGTTTGAGTATGCTCCAAATGGAAACGTATATGAGCATTTACATGTTGATGAAATGGAACCTCTTGATTGGAGTCAAAGGATAAAAATTATCATGGGGATTGCGTATTTTCTTCAATACATGCACCATGACTTAAATCCACCTATGGCACAAAGCGAGCTTCTTTCAAGTCTGATATGTTTAACAGATGATTTTGCTGCTAAGGTTGCAGAAGTTACTTTTAGAAAAATTGTGTCACCAGAGGAGTCAGTGTGTGATTCAAAGAAATCTGATGTGTCCGAAGATGATTTTGAAACCAATGTTTATGACTTTGGAATGTTATTACTCGAAATCATCTCAGGAAAATTACCTTACTCGGAAAAACACGGCAACCTGGTGGACTGGGCTGCTAAGTACTTAAAGGACGAAACAAGCTTCAAAGACTTGGTCGATCCCACCCTCCAATCTTTCAAGGAGAATGAACTTAATGGCATTTGTGAGGTGATCCAAGATTGTATCCAACCTGATCCAAAGTTAAGAGTAACAATGAGGGAAGCGACTTCCAAATTAAGGGAAGTGCTTGGTCTGTCACCTGAGCAAGCTGTCCCAAGACTTTCTCCACTCTGGTGGGCTGAATTGGAGATCTTGTCAGTGGAGGCGACTTAA 2133 0.3938 MEQRRNTFGFCLRIYICLISVWGIRDCWSVNDEGLALLAFQARITFDPFNALVNWNPNDCDPCMWFGVHCVDGKVQVLELKGLSLEGTLAPELGKLSHLNSIVLCKNNFSGAIPKELGDLRKLELLDLRGNNLSGNIPEEIGNMSLLEHLLLCDNKIEGDGDPQDGGKLKFPSKSLLVESCSSPLSTLISCINRKFGHCVWQRNFKQWYKSDSLIILTKATLTKFANNAFAWPLFKLGKSASHGHKEDYCDILPSSNVPKIARNVPEFVCSARRKLLQSSGNNLAAAPFSDKPTIEFSSAPTTFSSGAFPAFPDPHSDAPDDASDDASDENQSDNTFDGNQTNQHVNKGAYRKMWKIIISIILLVLVIIIITLMYIWRKRAARVIGPWKTGISGQLQRAFITGVPKLNRAELETACEDFSNIVVNSYEGCTIYKGTLSSGVEIAVVSTLITSSKNWSKSMERQYRKKIDTLSRINHKNFINLIGYCEEEEPFTRMLVFEYAPNGNVYEHLHVDEMEPLDWSQRIKIIMGIAYFLQYMHHDLNPPMAQSELLSSLICLTDDFAAKVAEVTFRKIVSPEESVCDSKKSDVSEDDFETNVYDFGMLLLEIISGKLPYSEKHGNLVDWAAKYLKDETSFKDLVDPTLQSFKENELNGICEVIQDCIQPDPKLRVTMREATSKLREVLGLSPEQAVPRLSPLWWAELEILSVEAT* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02502 710 Pfam Protein tyrosine and serine/threonine kinase 432 679 IPR001245 GO:0004672|GO:0006468
Phac6g02502 710 Gene3D Ribonuclease Inhibitor 30 183 IPR032675 -
Phac6g02502 710 Gene3D Transferase(Phosphotransferase) domain 1 501 689 - -
Phac6g02502 710 FunFam Nuclear pore complex protein NUP107 30 170 - -
Phac6g02502 710 MobiDBLite consensus disorder prediction 315 343 - -
Phac6g02502 710 PANTHER PROTEIN MALE DISCOVERER 2 14 708 - -
Phac6g02502 710 FunFam Inactive receptor-like serine/threonine-protein kinase 391 500 - -
Phac6g02502 710 Gene3D Phosphorylase Kinase; domain 1 392 500 - -
Phac6g02502 710 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Phac6g02502 710 SUPERFAMILY L domain-like 29 159 - -
Phac6g02502 710 SUPERFAMILY Protein kinase-like (PK-like) 431 678 IPR011009 -
Phac6g02502 710 ProSiteProfiles Protein kinase domain profile. 379 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02502 Phac-Chr6 23435677 23441443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02502 70 679 Receptor kinase-like Gene Family AT5G49660 24.726 4.04e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Phac6g02502 PK_Tyr_Ser-Thr 3.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02502 - - vun:114189247 983.015