Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02500 ATGACTGAGGAAAGTAGTCTTTTTGTCTCAACTGTTGATGTGAATGAGAGTAATCTTGGTAAATACCGTCATGTCCCTGAACTGCACATGCAGCTAAAACAAGACCACAAACATAACCATTCCATAACCATTTTGTCAGATCTTCATCTCTCTGCACCAACAGGAACACCCCTCACCCTGCCAAAGGAATCAGGAGGAATGGAGAAAAATGTTCTGATGCAAAAGTATGAGATTGGACGTTTCCTTGGACAAGGAAACTTCGCCAAAGTTTACCATGCAAAGAACTTGAAGACAGGTCAGAGCGTGGCCGTGAAAGTAATCAACAAAGAGATGATTATGAAGGTGGGTATGAAGGAGCAAATCAAGCGTGAAATCTCAGTGATGCGCCTTGTGAGGCACCCCAACGTTGTGCAGCTGTATGAGGTCATGGCCACCAAGAAAAAGATATATTTTGCAATGGAAATTGTGAAAGGTGGTGAACTTTTTGATAAAGTGTCCAGAGGGAGGTTGAGGGAGGATGTAGCAAGAAAATATTTTCAGCAGCTGATTGATGCTGTTGATTACTGCCACAGCCTAGGGGTGTGTCATCGTGATCTCAAGCCAGAGAACCTTCTTGTTGATGAAAATGGGGATCTCAAAATTACAGATTTTGGTTTGAGCGCATTGGTTGAGTCCAGAAAGAACAATGGCCTTCTTCACACGGTATGTGGAACTCCAGCCTATGTAGCTCCTGAGGTGATAAAGAAGAAAGGATATGATGGAGCCAAGGCAGATATATGGTCTTGTGGAGTGATTCTATATGTTCTTTTGGCAGGTTTTGTTCCTTTCAATGATAAAAATTTGATGGAGATGTATAAGAAGATTATCAAAGCAGATTGCCAATTCCCAAAATGGTTCTCTCCAGATGTAAAAAGACTTATTTATAGGATCCTTGATCCGAATCCAACGAGGAGAATTACTATTGATAAGATTGTGCAAAGTCGTTGGTTTAGAAAGGGGTATGTGCAGATTCAAGAATTTCAGCTGCCACCATTGTTCCCTAGAAATGGTGATGATATCTTGGATGTTCAGGTTGCATTTGATTCATCAGATTCAGATGGCAGTCCAATGTCAATTAAAGAAGAAAGCCCCCTGAAGCTATATCAATTCAATGCATTTGATTTGATATCACTGTCATCAGGTCTTGATCTTTCTGGTTTGTTTGAAAATGATCAGAATGAAAGACAAGTGACAAGATTTACTACAAGAGAAAGACCTTCAACTGTTGTATCAATGCTTGAAGAGATAGCACAGATAGATGAAAAATTTAAAGTCTCTAAGAAAGATGGGGTAGTTAGATTGGAGGGATGCCAGACGGGGATAAAAGGCCAACTCACTCTAGATGCAGAAATTTTTGAACTTACATCTTCCTTGCATGTTGTCGAGTCTGTGGAGGATATCAGCAGTAGCAATGGTAGCATCACACAGACTTCTTTTCTTATTGGATAG 1488 0.4046 MTEESSLFVSTVDVNESNLGKYRHVPELHMQLKQDHKHNHSITILSDLHLSAPTGTPLTLPKESGGMEKNVLMQKYEIGRFLGQGNFAKVYHAKNLKTGQSVAVKVINKEMIMKVGMKEQIKREISVMRLVRHPNVVQLYEVMATKKKIYFAMEIVKGGELFDKVSRGRLREDVARKYFQQLIDAVDYCHSLGVCHRDLKPENLLVDENGDLKITDFGLSALVESRKNNGLLHTVCGTPAYVAPEVIKKKGYDGAKADIWSCGVILYVLLAGFVPFNDKNLMEMYKKIIKADCQFPKWFSPDVKRLIYRILDPNPTRRITIDKIVQSRWFRKGYVQIQEFQLPPLFPRNGDDILDVQVAFDSSDSDGSPMSIKEESPLKLYQFNAFDLISLSSGLDLSGLFENDQNERQVTRFTTRERPSTVVSMLEEIAQIDEKFKVSKKDGVVRLEGCQTGIKGQLTLDAEIFELTSSLHVVESVEDISSSNGSITQTSFLIG* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02500 495 CDD STKc_SnRK3 75 329 - -
Phac6g02500 495 FunFam Non-specific serine/threonine protein kinase 67 155 - -
Phac6g02500 495 FunFam Non-specific serine/threonine protein kinase 69 370 - -
Phac6g02500 495 SUPERFAMILY Protein kinase-like (PK-like) 72 380 IPR011009 -
Phac6g02500 495 Gene3D Transferase(Phosphotransferase) domain 1 66 374 - -
Phac6g02500 495 Gene3D Kinase associated domain 1, KA1 379 486 - -
Phac6g02500 495 FunFam Non-specific serine/threonine protein kinase 379 487 - -
Phac6g02500 495 SMART serkin_6 76 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02500 495 Pfam Protein kinase domain 76 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02500 495 Pfam NAF domain 383 440 IPR004041 GO:0007165
Phac6g02500 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Phac6g02500 495 ProSiteProfiles Protein kinase domain profile. 76 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02500 495 ProSiteProfiles NAF domain profile. 378 402 IPR018451 GO:0007165
Phac6g02500 495 CDD CIPK_C 384 475 - -
Phac6g02500 495 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
Phac6g02500 495 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 67 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02500 Phac-Chr6 23414036 23415891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02500 67 475 CBL-interacting serine-threonine protein kinases AT5G45820 61.743 2.97e-180 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac6g02500 Pkinase 1.5e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02500 K07198 - gmx:100807927 666.381