Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02491 ATGGATCAAAACAGAAACGAAGAAAGAGGTGAGATACTGGGTCCTGTCCATGAAGGGGTAGATGGGAATTTGAGTCATTTGGTTGAAGGGCTAGTTATTGATGCCGTAGATGGGAACAGCTTGGGTGACAGAGTTGGTGATGGCGGAGAAGCTGGAACTTCAGTAGAGGTGGGTAAAGATTTGGGATCTGAAAAGGAACTAAAGGAGGGCCTTGAGGAAGTTAAGGGTCGGGACAAGTATGATCAAGAAAATATCAGTGATGATAAATTGCTTGGGGTTGATCAGGGAACCAGTTATAATTCAAACCATTTGGTTAATCAGGAAGTGATTGAAACTGTGGTTGTAATTGAGTCTTTTGAGACTGAGTATGTCAATGAGAATAATAGGAAATTGGAACCAAAAGTTAATGAATCGGGGTTGAACTTTACATCCATGAAAGTACCAGAAGGGACGTCTGAAACTGATAAAAATTCATGTGTGATTGATATAAAATGCAGCAGCCTGAAAAAGTTCTCTGAGAATTCTGAAGGTGGACAGATTTGTAGGATTTGCCATCTGCCTTCTGTGCAGTCATCGGATGAAAGTGAAACAACTGTTGGCCCTGCTGCTAGTAGTGCTACGAGTTCTGATTTGATTCAGCTTGGGTGTGCATGCAAAGATGAGCTAGGCATTGCCCATCTTCACTGTGCCGAGGCGTGGTTCAAGCTTAAGGGGAACAGGTTATGTGAAATATGTAGTGAAACTGCAACAAATGTTTCGGGTGTTAGTAATTATGAATTTTTGGAAAAGTGGAATGAAAGAAGGTTCATGGAAAACGGTGGCAACTCATCCCGCAGGTTTGGTGGATGCTGTCGAGGACAGCCATTTTGTAACTTCTTGATGGCATGCCTGGGAGTGGTGGATTTCTGGCATACATGCTATGATGCATCACAATTTAGTAGGATGTTAATGCTTAACCACATCTCCTAG 969 0.4241 MDQNRNEERGEILGPVHEGVDGNLSHLVEGLVIDAVDGNSLGDRVGDGGEAGTSVEVGKDLGSEKELKEGLEEVKGRDKYDQENISDDKLLGVDQGTSYNSNHLVNQEVIETVVVIESFETEYVNENNRKLEPKVNESGLNFTSMKVPEGTSETDKNSCVIDIKCSSLKKFSENSEGGQICRICHLPSVQSSDESETTVGPAASSATSSDLIQLGCACKDELGIAHLHCAEAWFKLKGNRLCEICSETATNVSGVSNYEFLEKWNERRFMENGGNSSRRFGGCCRGQPFCNFLMACLGVVDFWHTCYDASQFSRMLMLNHIS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02491 322 Pfam RING-variant domain 196 245 IPR011016 GO:0008270
Phac6g02491 322 MobiDBLite consensus disorder prediction 43 63 - -
Phac6g02491 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 164 257 IPR013083 -
Phac6g02491 322 SUPERFAMILY RING/U-box 178 248 - -
Phac6g02491 322 ProSiteProfiles Zinc finger RING-CH-type profile. 173 252 IPR011016 GO:0008270
Phac6g02491 322 PANTHER ZINC FINGER, RING-CH-TYPE 76 298 - -
Phac6g02491 322 SMART ringv_2 180 246 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02491 Phac-Chr6 23362176 23365188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02491 161 297 C3H Transcription Factor Family AT5G05830 37.324 1.11e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02491 - - vra:106775190 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02491 6 23362176 23365188 Phac6g02491 6 23362176 23365188 ECH