Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02456 ATGAAGTGGGGAGGAAGAAAGCATTCTTTAACTTCCTCTTCTTCTTCTGGCTCTTCCTTCATTTCTCATGCATCTCCTTTCTCTTGGTTATCCAAGTTCAAGAACATGAGAATCAATTCAGAGCCAAGTGCTGCAAAAAGGAAGCAGAAGGCCAAGCCCAGTGGTTCACCAAAATATTTTTGTGAGATTGGAGATAGATGTTATGTAAAGGATGATGGTGATTTCTGTAGACAACCTTTAAATGAAGAAAGTCGTGAGGATAAGAAGAATAAAGATATTGATGAGAGTGTCTTTCCCTCCTTAAGTTGTCTTGGTGTTACAAGGGATTCTAAGAAACATGGAAAGAAGGGCACACTGGAGTTAAAGGAGAGGGATATTGGTCAAGGAGAAGAAAGAAAGTGGTTGAATGATGGAAGGGTTTCAAAGGAGATGGATGTGTCCAATAGAGAAAAGGAATATGAAAACTTAAGGAGGAGATTTGAGAGCAAAGCACAGAAGGCTTTTCAAGACCAACTCTTGACATTAGGAAGAGAAATGGAGGAACTTAAGTTTGGATCCAGTAAAGCAGTGGAAAAAGATGTGTTGCAATTTGAATCACCTAGAACAATTTGCACCCCAAGAACACATGCTTTTTCCTCTTCAGCAATTTCAAGGAATCCCATCCTTGGAGATATTATAGAAAATTTTGAGAAAAGTGAAAAGCAACCTCACAAGAAAATGAGTTCGGAGAGGCAGAACTTGAAACAAACCGAGGAGATGAAGGTAATGACGAACAGGAAGAAGCGATCACATCATCTCAGCAGAGAACATCAGAGGAGGAAACCAAAGCCGAGCTCTAGGGTCCAAATACATTCTCCAAGGATGGTTTCTAAGGTTGAAATTTGCAAAATAAAGGCCTTGGAAGACATGAAGAAAGCAAAACTAAAGATGAAGAAAGAAAGGGAGGAGATTGTGGAAGAAATAACAGGATTAGAGAGCTTTGCTGTGATTAAGTCTTCAATAGACCCAAAGCAAGATTTCAGAGATTCAATGATTGAGATGATCATAGAGAATCAGATTATTGATCCAGAAGAAATGGAAGATCTTTTGGCATGTTATCTGACTTTGAATGCAGATGAATATCATGATCTCATCATAAAAGTGTTCAGGAAGGTATGGTTTGACATTAGCCAAGGTATTTTGGGTATTAAACTAAATATGCAATGTGGTTACTATTGA 1218 0.3842 MKWGGRKHSLTSSSSSGSSFISHASPFSWLSKFKNMRINSEPSAAKRKQKAKPSGSPKYFCEIGDRCYVKDDGDFCRQPLNEESREDKKNKDIDESVFPSLSCLGVTRDSKKHGKKGTLELKERDIGQGEERKWLNDGRVSKEMDVSNREKEYENLRRRFESKAQKAFQDQLLTLGREMEELKFGSSKAVEKDVLQFESPRTICTPRTHAFSSSAISRNPILGDIIENFEKSEKQPHKKMSSERQNLKQTEEMKVMTNRKKRSHHLSREHQRRKPKPSSRVQIHSPRMVSKVEICKIKALEDMKKAKLKMKKEREEIVEEITGLESFAVIKSSIDPKQDFRDSMIEMIIENQIIDPEEMEDLLACYLTLNADEYHDLIIKVFRKVWFDISQGILGIKLNMQCGYY* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02456 405 MobiDBLite consensus disorder prediction 231 285 - -
Phac6g02456 405 MobiDBLite consensus disorder prediction 7 23 - -
Phac6g02456 405 MobiDBLite consensus disorder prediction 231 258 - -
Phac6g02456 405 Coils Coil 296 320 - -
Phac6g02456 405 ProSiteProfiles OVATE domain profile. 329 388 IPR006458 -
Phac6g02456 405 MobiDBLite consensus disorder prediction 259 280 - -
Phac6g02456 405 MobiDBLite consensus disorder prediction 1 23 - -
Phac6g02456 405 Coils Coil 146 166 - -
Phac6g02456 405 MobiDBLite consensus disorder prediction 40 59 - -
Phac6g02456 405 Pfam Transcriptional repressor, ovate 333 389 IPR006458 -
Phac6g02456 405 NCBIfam uncharacterized plant-specific domain TIGR01568 327 389 IPR006458 -
Phac6g02456 405 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 193 390 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02456 Phac-Chr6 23180053 23181852 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phac6g02456 Ovate 7.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02456 - - gmx:102666239 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02456 6 23180053 23181852 Phac6g02456 6 23180053 23181852 ECH
Phac2g03640 2 37301856 37303383 Phac6g02456 6 23180053 23181852 PCT