Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02438 ATGTCTGATTTGAACCATGACGTGGCTTTTAACATGAACGCTGATTCCTCCAAAAGTTCTGATGACAACGAAGCCTCTGTGCCCCTTTTGCAGAAGTTGGTGGCAGAAGCGGTGGGGACGTACTTTTTGATATTCGCAGGGTGTGGTTCGATTGTGGTGAACCTTGGTAACGACAAGGTGGTGACACAACCTGGGATTTCGATTGTTTGGGGACTCGCTGTTACGGTTTTGGTTTACTCTGTTGGTCATATCTCTGGTGCTCATTTCAACCCTGCAGTCACCATTGCTCATGCTTCCATCAAAAGGTTTCCTTTGAAGGAGTTGAAGGTACCAGCATATATAGTAGCCCAGCTTGTTGGAGCCATACTTGCCAGTGGAACTCTGAGACTTGTATTCAGAGGCAAGGGTGACCATTTTGCAGGAACAGTCCCTGCCGGTTCTGATATGCAAGCTTTTGTGGTGGAATTCTTGATCACTTTCTTTCTCATGTTCGTCATTTCTGGAGTTGCCACCGATGACAGAGCGATTGGTGAGTTGGCAGGGGTGGCAGTTGGGTCTACGGTACTGCTAAATGTGATGATTGCCGGGCCAATCACTGGAGCGTCAATGAATCCAGCAAGAAGCTTGGGACCTGCTATTTTGCACCGTGAGTATAGAGGAATATGGATATATATGGTGTCACCAATTGTTGGAGCTTTAGCTGCTACATGGCTCTACAATTTCATCAGTTACACAAAGAAGCCATCGGGTGAGATCACCAGGACTCCCTCTTTCCTCCAAGGGCGTCTTCAAGCTCACTGA 801 0.4744 MSDLNHDVAFNMNADSSKSSDDNEASVPLLQKLVAEAVGTYFLIFAGCGSIVVNLGNDKVVTQPGISIVWGLAVTVLVYSVGHISGAHFNPAVTIAHASIKRFPLKELKVPAYIVAQLVGAILASGTLRLVFRGKGDHFAGTVPAGSDMQAFVVEFLITFFLMFVISGVATDDRAIGELAGVAVGSTVLLNVMIAGPITGASMNPARSLGPAILHREYRGIWIYMVSPIVGALAATWLYNFISYTKKPSGEITRTPSFLQGRLQAH* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02438 266 ProSitePatterns MIP family signature. 88 96 IPR022357 -
Phac6g02438 266 Gene3D Glycerol uptake facilitator protein. 3 252 IPR023271 -
Phac6g02438 266 PANTHER AQUAPORIN NIP2-1 17 258 IPR034294 -
Phac6g02438 266 Pfam Major intrinsic protein 26 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02438 266 NCBIfam MIP family channel protein 35 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02438 266 CDD MIP 31 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02438 266 SUPERFAMILY Aquaporin-like 27 249 IPR023271 -
Phac6g02438 266 PRINTS Major intrinsic protein family signature 31 50 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02438 266 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02438 266 PRINTS Major intrinsic protein family signature 70 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02438 266 PRINTS Major intrinsic protein family signature 185 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02438 266 PRINTS Major intrinsic protein family signature 154 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02438 266 PRINTS Major intrinsic protein family signature 222 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02438 Phac-Chr6 23068256 23071137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02438 27 264 Major Intrinsic Protein MIP AT5G37820 58.403 8.52e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02438 K09874 - gmx:100812577 403.29