Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02437 ATGTCTGATTTGAACCATGACGTGGCTTTTAACATGAACGCTGATTCCTCCAAAAGTTCTGATGACAACGAAGCCTCTGTGCCCCTTTTGCAGAAGTTGGTGGCAGAAGCGGTGGGGACGTACTTTTTGATATTCGCAGGGTGTGGTTCGATTGTGGTGAACCTTGGTAACGACAAGGTGGTGACACAACCTGGGATTTCGATTGTTTGGGGACTCGCTGTTACGGTTTTGGTTTACTCTGTTGGTCATATCTCTGGTGCTCATTTCAACCCTGCAGTCACCATTGCTCATGCTTCCATCAAAAGGTTTCCTTTGAAGGAGGTACCAGCATATATAGTAGCCCAGCTTGTTGGAGCCATACTTGCCAGTGGAACTCTGAGACTTGTATTCAGAGGCAAGGGTGACCATTTTGCAGGAACAGTCCCTGCCGGTTCTGATATGCAAGCTTTTGTGGTGGAATTCTTGATCACTTTCTTTCTCATGTTCGTCATTTCTGGAGTTGCCACCGATGACAGAGCGATTGGTGAGTTGGCAGGGGTGGCAGTTGGGTCTACGGTACTGCTAAATGTGATGATTGCCGGGCCAATCACTGGAGCGTCAATGAATCCAGCAAGAAGCTTGGGACCTGCTATTTTGCACCGTGAGTATAGAGGAATATGGATATATATGGTGTCACCAATTGTTGGAGCTTTAGCTGCTACATGGCTCTACAATTTCATCAGTTACACAAAGAAGCCATCGGGTGAGATCACCAGGACTCCCTCTTTCCTCCAAGGGCGTCTTCAAGCTCACTGA 795 0.4755 MSDLNHDVAFNMNADSSKSSDDNEASVPLLQKLVAEAVGTYFLIFAGCGSIVVNLGNDKVVTQPGISIVWGLAVTVLVYSVGHISGAHFNPAVTIAHASIKRFPLKEVPAYIVAQLVGAILASGTLRLVFRGKGDHFAGTVPAGSDMQAFVVEFLITFFLMFVISGVATDDRAIGELAGVAVGSTVLLNVMIAGPITGASMNPARSLGPAILHREYRGIWIYMVSPIVGALAATWLYNFISYTKKPSGEITRTPSFLQGRLQAH* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02437 264 ProSitePatterns MIP family signature. 88 96 IPR022357 -
Phac6g02437 264 Gene3D Glycerol uptake facilitator protein. 3 250 IPR023271 -
Phac6g02437 264 CDD MIP 31 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02437 264 Pfam Major intrinsic protein 26 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02437 264 PANTHER AQUAPORIN NIP2-1 17 256 IPR034294 -
Phac6g02437 264 SUPERFAMILY Aquaporin-like 27 247 IPR023271 -
Phac6g02437 264 NCBIfam MIP family channel protein 35 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02437 264 PRINTS Major intrinsic protein family signature 31 50 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02437 264 PRINTS Major intrinsic protein family signature 183 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02437 264 PRINTS Major intrinsic protein family signature 107 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02437 264 PRINTS Major intrinsic protein family signature 70 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02437 264 PRINTS Major intrinsic protein family signature 220 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac6g02437 264 PRINTS Major intrinsic protein family signature 152 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02437 Phac-Chr6 23068256 23071137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02437 27 262 Major Intrinsic Protein MIP AT5G37820 58.898 1.12e-96 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02437 K09874 - gmx:100812577 408.297