Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02404 ATGGTGACAGGAGAAAGACAAGCCGCAAGGATCCGTGGCATGTACTTGAAAACTATATTGAAGCAGGACATTGCCTTTTTTGACACTGAAACAACAAGTGGTGAGGTAATTGGAAGAATGTCCGGTGACACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTGTTCAACTTGTTACATCATTTTTTGGTGCCTTTATAATTGCCTTCACAAAAGGATGGCAACTCTGTCTAGTTTTGCTTGCATGTATTCCTTGTATTGTTGTTGTTGGAGGCATTATGTCCATGATGATGGCGAAAATGTCAAATCGCGGGCAAGTCGCTTATGCAGAAGCTGGAAATGTTGTAGAGCAAACAGTTGGAGCCATTAGAACTGTTGCCTCTTTTACTGGTGAGAAAAAAGCAATAGAAAAGTACAATAACAAGTTAAGAGTAGCTTATACTAAAACTGTTCAACAAGGGCTGGCTTCAGGATTTGGAATGGGAATACTTTTGTTGATTATATTTTGCACCTATGCACTTGCCATGTGGTATGGCTCTAAACTCATTATGGATAAAGGCTATGATGGTGGAAGTGTTTTCAACATTATCATATCAATCAATACTGGTGGAATGGCACTTGGTCAGGCAACTCCATGCGTGAATTCATTTGCAGCGGGTCAAGCAGCAGCATATAAGATGCTTGAGACAATTAAACGAAAGCCGAAAATAGATGCTTATGACACCAATGGGGTTGTCTTGGAAGACATGAAGGGAGATATTGAACTCAAGGATGTTTACTTCAGATACCCTGCAAGGCCAGATGTTCAGATATTTTCTGGATTCTCATTCTATATTCCAAGTGGCACAACTGCTGCTTTAGTGGGACAAAGTGGAAGTGGGAAGTCAACTATAATCAGTTTATTAGAAAGATTTTATGATCCTGAAGCTGGAGAAGTTCTTATAGATGGTGTGAATTTGAAGAATTTTCAAGTTAGATGGATTAGAGAACAGATTGGACTTGTTGGTCAAGAACCTGTCCTTTTTACAGCTACTATTAAAGAAAACATAGCATACGGGAAAGAAGGTGCAACAGATGAGGAGATAAATACAGCAATAACACTTGCCAATGCAAAAATATTCATTGATAAGCTGCCTCAGGGCATTGACACGATGGTAGGAGGGCATGGAACTCAACTTTCCGGTGGGCAAAAGCAAAGAATTGCAATTGCAAGGGCAATTTTGAAGAACCCAAGAATCATTCTTCTTGATGAAGCTACTAGTGCATTGGATGTTGAGTCTGAACGTATTGTTCAAGTAGCACTAGAAAAAGTTATGACACAAAGGACTACTGTAATTGTTGCACATCGTTTGACAACTATTAGACATGCTGACATCATAGCAGTGGTACATCAGGGCAAAATTGTGGAGAAAGGAACTCATGATGAGTTAATCAAGGATGCTGATGGCTCTTATTCTCAGCTTGTTCGTTTACAAGAAGGAAATAAAGGAGCAGAAGAAGGGAGTCGTAAGTCAGAAGCAGATAAGTCAAATAACAATAGTTTCAGCTTATCTCGGAGAACATCCTTTGCAAGATCAAGCAGTAAACACTCTCTCTCATTTGGTTTTGCGCTTCCTTATCAAATTTCCTTGCACGAGTCTGGAGAGGGAGATAGCGGGGATGTTGAAAGTAGTGAAGTTGATAATGAGAAGCCTCAAAAGGTTGCTGTTAGCCGTTTGGTCAAGTTGAACAAGCCAGAGGTTCCTGTCTTATTACTAGGATCCATTGCAGCAGCAATACATGGCCTTACTCTTCCTGTATTTGGACTCTTGCTTTCATCAGCTGTTAACACGTTCTTTAAACCTCCTGAACAGCTTAGGAAAGATTCTGTATTTTGGTCACTTCTATTTGTTGGTTTGGGGATTGTCGCTCTGGTGGCTATACCATTGCAAAACTACTTATTTGGGATAGCTGGTGGGAAACTTATAGAACGAATTCGTTCAATGACATTTAATAAGGTTGTGCACCAAGAAATCAGTTGGTTTGATCGTCCTTCAAATTCAAGTGGTGCAGTTAGTGCAAGGCTAGCTTCTGATGCTTCTGCAGTGAGAAGTCTTGTCGGTGACACCTTGGCCCTCATTGTGCAAAACATAGCAACAATCACAGCAGGTCTAGTTATAGCATTCACTGCTAATTGGATTTTGGCTTTTGTAATTCTGGCTGTGTCACCCTTGTTGCTTCTACAAGGATACCTTCAGACCAAGTTCGTAAAAGGATTCAGTGCAGATGCAAAGGTGAAGTATGAAGAAGCAAGTCAGGTGGCAAATGAGGCTGTTGGTAGTATTAGAACTGTTGCATCATTCTGTGCTGAGCCAAAGGTGATGGATATGTACACGAAGAAATGTTCAGGGCCAGAAAAACAAGGTGTTCGCTTGGGGCTTGTTAGTGGTGCAGGACTAGGTTTCTCTTTTCTAGCTCTATACTGCACAAATGCTTTCTGTTTCTACATAGGATCTATTCTTGTGCAACACGGGAAAGCAACTTTTGGAGATGTTTTCAAGGTTTTCTTTGCCTTAACAGTTACGGCAGTTGGTGTTTCCCAGAGTAGTGCCTTGGCTCCAGATACAAACAAAGCCAAAGATTCTGCCACTTCAATATTTGAAATTCTTGATACAAAACCAGCGATTGACTCCAGCAGTGATGAGGGCACAACACTAGACACCATAAAAGGTGACATTGAACTACAACAAGTAAGCTTTTGTTACCCAACAAGGCCTAATATTCAAATTTTCAAGGATTTGTGTCTACGCATGCCAGCTGGAAAGACCGTTGCCTTGGTTGGAGAAAGTGGGAGTGGAAAATCAACAGTGATCAGCCTCTTAGAGAGATTTTACAACCCTGATTCTGGACGCCTACTACTTGATGGAGTGGATATGAAAACCTTCAGACTAAGTTGGCTGAGGCAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAATGAAAGCATTCGTGCCAACATAGCTTATAGCAGAGAGGGAGGTGTCACAGAGGAAGAGATAGTCGCAGCAGCAGAAGCAGCAAATGCACACAAGTTCATAAGCTCTCTACCACATGGTTATGACACCCATGTGGGAGAAAGAGGGACACAATTGTCAGGAGGACAAAAGCAGCGCATAGCCATTGCAAGAGCCATTCTGAAAGACCCCAGAATCCTTTTGCTGGATGAGGCAACCAGTGCACTTGATGCAGAATCAGAGCGTGTGGTTCAAGAGGCTCTAGATAAAGTAAGTGTTAATAGAACTACTGTTGTGGTAGCTCACCGTCTTACAACAATTAAAGGTGCTGACATTATAGCAGTAGTAAAAAATGGAGTGATTGCTGAGAAAGGAGGACATGAGGCTTTGATGAAGATTGAAGGTGGAGTTTATGCTTCATTGGTATCTCTCCATAGTGCGTCATAA 3456 0.4146 MVTGERQAARIRGMYLKTILKQDIAFFDTETTSGEVIGRMSGDTILIQDAMGEKVGKFVQLVTSFFGAFIIAFTKGWQLCLVLLACIPCIVVVGGIMSMMMAKMSNRGQVAYAEAGNVVEQTVGAIRTVASFTGEKKAIEKYNNKLRVAYTKTVQQGLASGFGMGILLLIIFCTYALAMWYGSKLIMDKGYDGGSVFNIIISINTGGMALGQATPCVNSFAAGQAAAYKMLETIKRKPKIDAYDTNGVVLEDMKGDIELKDVYFRYPARPDVQIFSGFSFYIPSGTTAALVGQSGSGKSTIISLLERFYDPEAGEVLIDGVNLKNFQVRWIREQIGLVGQEPVLFTATIKENIAYGKEGATDEEINTAITLANAKIFIDKLPQGIDTMVGGHGTQLSGGQKQRIAIARAILKNPRIILLDEATSALDVESERIVQVALEKVMTQRTTVIVAHRLTTIRHADIIAVVHQGKIVEKGTHDELIKDADGSYSQLVRLQEGNKGAEEGSRKSEADKSNNNSFSLSRRTSFARSSSKHSLSFGFALPYQISLHESGEGDSGDVESSEVDNEKPQKVAVSRLVKLNKPEVPVLLLGSIAAAIHGLTLPVFGLLLSSAVNTFFKPPEQLRKDSVFWSLLFVGLGIVALVAIPLQNYLFGIAGGKLIERIRSMTFNKVVHQEISWFDRPSNSSGAVSARLASDASAVRSLVGDTLALIVQNIATITAGLVIAFTANWILAFVILAVSPLLLLQGYLQTKFVKGFSADAKVKYEEASQVANEAVGSIRTVASFCAEPKVMDMYTKKCSGPEKQGVRLGLVSGAGLGFSFLALYCTNAFCFYIGSILVQHGKATFGDVFKVFFALTVTAVGVSQSSALAPDTNKAKDSATSIFEILDTKPAIDSSSDEGTTLDTIKGDIELQQVSFCYPTRPNIQIFKDLCLRMPAGKTVALVGESGSGKSTVISLLERFYNPDSGRLLLDGVDMKTFRLSWLRQQMGLVGQEPILFNESIRANIAYSREGGVTEEEIVAAAEAANAHKFISSLPHGYDTHVGERGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDKVSVNRTTVVVAHRLTTIKGADIIAVVKNGVIAEKGGHEALMKIEGGVYASLVSLHSAS* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02404 1151 Pfam ABC transporter 277 424 IPR003439 GO:0005524
Phac6g02404 1151 Gene3D - 899 1148 IPR027417 -
Phac6g02404 1151 Gene3D - 247 496 IPR027417 -
Phac6g02404 1151 Gene3D ABC transporter type 1, transmembrane domain 2 519 IPR036640 GO:0005524|GO:0016020
Phac6g02404 1151 FunFam ABC transporter B family member 1 567 875 - -
Phac6g02404 1151 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g02404 1151 FunFam ABC transporter B family member 1 247 496 - -
Phac6g02404 1151 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 909 1146 IPR003439 GO:0005524
Phac6g02404 1151 FunFam ABC transporter B family member 1 899 1149 - -
Phac6g02404 1151 CDD ABC_MTABC3_MDL1_MDL2 257 495 - -
Phac6g02404 1151 ProSitePatterns ABC transporters family signature. 1049 1063 IPR017871 GO:0005524|GO:0016887
Phac6g02404 1151 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 588 874 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g02404 1151 SMART AAA_5 284 476 IPR003593 GO:0016887
Phac6g02404 1151 SMART AAA_5 936 1129 IPR003593 GO:0016887
Phac6g02404 1151 Pfam ABC transporter 928 1077 IPR003439 GO:0005524
Phac6g02404 1151 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 257 493 IPR003439 GO:0005524
Phac6g02404 1151 SUPERFAMILY ABC transporter transmembrane region 3 241 IPR036640 GO:0005524|GO:0016020
Phac6g02404 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 899 1146 IPR027417 -
Phac6g02404 1151 CDD ABC_MTABC3_MDL1_MDL2 909 1145 - -
Phac6g02404 1151 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 230 - -
Phac6g02404 1151 MobiDBLite consensus disorder prediction 496 523 - -
Phac6g02404 1151 Pfam ABC transporter transmembrane region 588 859 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g02404 1151 Pfam ABC transporter transmembrane region 2 206 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g02404 1151 SUPERFAMILY ABC transporter transmembrane region 570 893 IPR036640 GO:0005524|GO:0016020
Phac6g02404 1151 PANTHER ABC TRANSPORTER B FAMILY 1 496 IPR039421 -
Phac6g02404 1151 ProSitePatterns ABC transporters family signature. 396 410 IPR017871 GO:0005524|GO:0016887
Phac6g02404 1151 Gene3D ABC transporter type 1, transmembrane domain 876 898 IPR036640 GO:0005524|GO:0016020
Phac6g02404 1151 Gene3D ABC transporter type 1, transmembrane domain 567 875 IPR036640 GO:0005524|GO:0016020
Phac6g02404 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 495 IPR027417 -
Phac6g02404 1151 CDD ABC_6TM_Pgp_ABCB1_D2_like 578 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02404 Phac-Chr6 22790150 22796163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02404 566 1151 Calmodulin-binding Proteins AT2G36910 41.107 2.01e-136 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02404 K05658 - gmx:100792531 1986.85