Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02399 ATGGAAATGCCCAGAGAGAAAAGGGGAAGAGCATTAAAAATGACAAACTTTAGTTCTAGTTACAGTACTTATAGTTTTATTTGCCATGGGGTTCTACTTCCCCTACTTCTGTTATCAGAGTTCTTCTTTCAACTTGCATGGTGTGGCTCAACAGTTAAGTTCCTTCCTGGATTCGAGGGACCCCTCCCTTTTGTTCTTGAAACAGGATATGTGGGAGTGGGCGAATCAGAGGATGTGCAGGCATTCTACTACTTCATTGAGTCTGAGAAAAATCCAAAAGAGGATCCTCTCTTGCTTTGGCTCACTGGTGGCCCTGGTTGCTCAGCCCTCTCTGGCCTTGTCTTAGAAATAGGTCCACTTGGTTTTAAGAATGAGGAATATGATGGAACCCTTCCAAATTTATTCTATAGGTCACACTCATGGACTAAGGTTAGTAACATTATATTTGTAGACTTGCCTGTTTTCACTGGATTCACCTATGCCACAACAGAGTCTGCTGCTCAACAGCAACGAAGTGATTGGATGATTGTTCACCAGGTCCATCAATTCCTGAGGAAGTGGCTGATTGATCATCCAAATTTTTTGTCAAACGAAGTTTACATTGGTGGCGATTCATACTCTGGCATTCCTATTCCAGTGATTGTTCAAGAAATTTCACAAGAAAATGAAAAAGGGGTACAGCCATGGATAAATCTCCAGGGATACCTGCTAGGGAATGCAGTTACTACTCGAAGAGAGAATAACTATAAAATTCCCTTTTCTCATGGAATGGGACTTATTTCTGACGAACTATACAATTCACTACAAAAAAATTGTAAAGGAGAGTACATGGATGTAGACACCAAAAATGTATTATGTACTAGAGATATGGAGCTATTCAATGAGGCTACATCAGGAATTAATACTGCCTATATTTTGGACCCATTATGTGAGTTTCTTGATACTGAAAGATCTTGGAGGAGATCACTAATTAGGAAATATCCCAGCAGGAATTTCCGAAATTCTCGTCTCAAATTTCCATCCTTGAGCTGTCGGGTAATCTTCATGCCTTGTTCAATCAGCAATGTTTACTTAATGCCTAGCTATGTATACTTTCTCTGCAGTTTTTGGGCCAATGATGATAATGTTCGCACTGCATTGCATATCCGTCAGGGAAGTATAGGAGAATGGCGTCGGTGTTCGATGGATATACCTCAGAAGAAGGATATCCCAAGCAGTTTTGAGTATCATGTAAATCTCAGTAGAATGGGATATCGATCGCTGATATACAGTGGCGATCATGATCTTTTGGTTCCTTTCTTGGCAACTCAAGCATGGATAAGATCTTTAAACTACTCCATCGTGGATGATTGGAGGCAATGGTATACAGATGATGGCCAAGTTGCAGGATACACAAGGACTTACTCCAATCGAATGACATTTGCAACTGGTGGAGGTCACACAGCTCCAGAGTACAGGCCTGAAGAATGCTTTGCCATGTACAGTAGATGGCTATCTAAGAGGGCTTTGTAG 1512 0.4107 MEMPREKRGRALKMTNFSSSYSTYSFICHGVLLPLLLLSEFFFQLAWCGSTVKFLPGFEGPLPFVLETGYVGVGESEDVQAFYYFIESEKNPKEDPLLLWLTGGPGCSALSGLVLEIGPLGFKNEEYDGTLPNLFYRSHSWTKVSNIIFVDLPVFTGFTYATTESAAQQQRSDWMIVHQVHQFLRKWLIDHPNFLSNEVYIGGDSYSGIPIPVIVQEISQENEKGVQPWINLQGYLLGNAVTTRRENNYKIPFSHGMGLISDELYNSLQKNCKGEYMDVDTKNVLCTRDMELFNEATSGINTAYILDPLCEFLDTERSWRRSLIRKYPSRNFRNSRLKFPSLSCRVIFMPCSISNVYLMPSYVYFLCSFWANDDNVRTALHIRQGSIGEWRRCSMDIPQKKDIPSSFEYHVNLSRMGYRSLIYSGDHDLLVPFLATQAWIRSLNYSIVDDWRQWYTDDGQVAGYTRTYSNRMTFATGGGHTAPEYRPEECFAMYSRWLSKRAL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02399 503 Gene3D alpha/beta hydrolase 61 503 IPR029058 -
Phac6g02399 503 FunFam Carboxypeptidase 359 502 - -
Phac6g02399 503 SUPERFAMILY alpha/beta-Hydrolases 52 500 IPR029058 -
Phac6g02399 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Phac6g02399 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Phac6g02399 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 187 212 IPR001563 GO:0004185|GO:0006508
Phac6g02399 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Phac6g02399 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 51 487 IPR001563 GO:0004185|GO:0006508
Phac6g02399 503 Pfam Serine carboxypeptidase 56 499 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02399 Phac-Chr6 22774034 22778693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02399 46 75 Calmodulin-binding Proteins AT2G22960 73.333 4.67e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02399 K16296 - gmx:100792006 782.326