Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02391 ATGTGTATATTTATGCTTACCTGGTCTTCCCAAGCTCAATTCTTTAGTCTTGAAATGCTGAAGGCTAATGAAGTGGCTGTCTCGACGAACAAGGAAATAGATGCTCATATCCCAAACTACCCAAGCTTACCTCCTCAACTCATTTGTCAACTTCATAACATGACCATGCATGCTGATGCAGAGACTGATGAAGTGTATGCACAGATGACCTTGCAACCTCTGAATCCTCAAGAGCAAAAGGAGGCATACCTTCCAGCGGAGTTGGGTACTCCTAGTAAACAGCCAACGAACTATTTCTGCAAAACTTTGACTGCAAGTGACACAAGCACTCATGGGGGATTCTCTGTACCTCGCCGTGCTGCTGAAAAAGTGTTCCCTGCATTGGATTTCTCTCAGCAGCCTCCTGCTCAAGAATTAATTGCAAGGGATTTGCACGGTAATGAGTGGAAATTCAGACATATCTTCCGGGGCCAGCCCAAAAGGCATCTACTTACAACTGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCTGTGCTGTTTATATGGAATGAAAAGAACCAACTTCTTCTTGGCATCCGTCGTGCTAATCGGCCACAAACTGTGATGCCTTCTTCAGTGTTGTCAAGTGATAGTATGCACTTGGGGCTTCTTGCTGCAGCAGCTCATGCAGCTGCTACAAATAGTCGTTTCACCATTTTCTATAACCCACGTGCTAGCCCATCAGAATTTGTCATACCCTTAGCGAAGTACGTTAAAGCTGTGTATCATACTCGAGTTTCAGTTGGTATGCGGTTTAGGATGCTGTTTGAAACTGAGGAATCAGGTGTACGACGATACATGGGTACAATAACTGGCATTAGTGACCTGGATCCTGCCCGGTGGCCAAACTCACACTGGCGCTCAGTTAAGGTTGGTTGGGATGAATCTACTGCTGGAGAGAGACAACCTAGAGTGTCTTTATGGGAAATTGAGCCATTAACTACTTTTCCTATGTATCCATCTCCATTCCCCCTTAGGCTTAAACGACCATGGCCGCCAGGACTGCCTTCATTCCACGTAGGCATGAAGGATGATGATTTTGGCCTGAATTCATCTCTCTTGTGGCTCCGAGACAGTGATAGAGGGCTGCAGTCTCCTACTTTTCAGGGGATAGGTGTTAATCCCTGGATGCAGCCTAGATTTGATCCCTCCATGTTGAATATGCAAACAGATATGTATCAAGCTGCTGCTGCTGCTGCTGTTCAGGAGATGAGGGGTTTGGATCCTTCCAAACAGCATTCTGCTTCCATACTTCAATTTCAGCAACCGCAGAACTTCCCAAACAGGACAGCTGCCTTTGTGCAGGCCCAGATGTTGCAGCAGACACAACATCAGCAGATTTTTGGAAATAATCAAGAGAATCCGCATTCACCACAATCTCATCTGCAAACTCAGGCTCATCTTCAGCAACAATTACAACATCAGCACTCATTCAATAGTCAGAATCATCATCAGCACCAGCAACAACAACTACGACAGACACAGCAGCAACAGCAACAAGTTGTAGATAATCAGCAAATTTCTAGTGCAGTTTCTTCAATGTCTCAGTTTGTTTCAGCTCCTCCACCTCAATCACCACCTATGCAAGCTATCTCTTCCTTGTGCCAACAGCAAAATTTTTCTGATGGGAACTCTGTGCCTACTATTGTTTCTCCCCTGCACAGTATCCTGGGTTCATTTCCGCAGGATGAAACATCTCACCTCCTGAACCTTCCTAGAACAAGCTCTTGGATTCCTGTTCAAAATTCATCTGGGTGGCCCTCAAAGCGTGTTGCAGTGGATCCTCTTATTTCTTCCGGAGTCTCCCAATGTGTTCTACCTCAGGTGGAGCAGCTAGGGCAGCCCCAGAGTACCGCGTCTCAAAATGCTATTACTTTACCACCTTTTCCTGGTAGGGAATGCTCCATAGACCAAGAAGGGAGCAATGATCCACAAAACCATCTCCTATTTGGTGTTAATATAGATCCCTCATCCCTTCTCATGCCTAATGGAATGTCAAACCTTAAGGGGGTTAGCAGCAACAATGACTCCTCAACCTTGCCATATCAATCTTCTAATTATCTGAATACCACCACAGGCACTGATTCTTCATTGAACCATGGAATAACACCCAGTATTGGCGGTGAAGCAGGTTACCTGCAGAGTCCAGAAAATGCTGGACAAGGAAACCCACTGAACAAAACCTTTGTGAAGGTTTATAAGTCAGGGTCCTTTGGAAGGTCATTGGATATCACAAAGTTCAGCAGCTACCATGAGCTGCGAAGTGAACTTGCTCAAATGTTTGGCCTTGAAGGCGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTAGACCGAGAGAACGATGTTCTTCTCCTTGGTGATGGCCCCTGGCCGGAATTCGTAAATAGTGTATGGTGCATAAAGATACTTTCTCCTCAGGAAGTGCAGCAAATGGGGAACTCTGGTCTTGAACTCTTGAACTCGGTTCCAATTCAAAGGCTCTCTAATGGCATCTGTGATGACTATGTGAGCCGTCAAGACCCAAGAAATTTAAGCCCTGGAATAACAGCTGTCGGGTCTTTAGACTACTGA 2637 0.4566 MCIFMLTWSSQAQFFSLEMLKANEVAVSTNKEIDAHIPNYPSLPPQLICQLHNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPALDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESGVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHVGMKDDDFGLNSSLLWLRDSDRGLQSPTFQGIGVNPWMQPRFDPSMLNMQTDMYQAAAAAAVQEMRGLDPSKQHSASILQFQQPQNFPNRTAAFVQAQMLQQTQHQQIFGNNQENPHSPQSHLQTQAHLQQQLQHQHSFNSQNHHQHQQQQLRQTQQQQQQVVDNQQISSAVSSMSQFVSAPPPQSPPMQAISSLCQQQNFSDGNSVPTIVSPLHSILGSFPQDETSHLLNLPRTSSWIPVQNSSGWPSKRVAVDPLISSGVSQCVLPQVEQLGQPQSTASQNAITLPPFPGRECSIDQEGSNDPQNHLLFGVNIDPSSLLMPNGMSNLKGVSSNNDSSTLPYQSSNYLNTTTGTDSSLNHGITPSIGGEAGYLQSPENAGQGNPLNKTFVKVYKSGSFGRSLDITKFSSYHELRSELAQMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNSGLELLNSVPIQRLSNGICDDYVSRQDPRNLSPGITAVGSLDY* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02391 878 Pfam Auxin response factor 225 308 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac6g02391 878 Pfam B3 DNA binding domain 99 200 IPR003340 GO:0003677
Phac6g02391 878 ProSiteProfiles PB1 domain profile. 745 829 IPR000270 GO:0005515
Phac6g02391 878 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 23 834 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac6g02391 878 SUPERFAMILY CAD & PB1 domains 744 820 - -
Phac6g02391 878 SMART B3_2 99 201 IPR003340 GO:0003677
Phac6g02391 878 Gene3D - 263 335 - -
Phac6g02391 878 Gene3D - 97 200 IPR015300 -
Phac6g02391 878 Gene3D - 742 834 - -
Phac6g02391 878 SUPERFAMILY DNA-binding pseudobarrel domain 84 228 IPR015300 -
Phac6g02391 878 MobiDBLite consensus disorder prediction 467 523 - -
Phac6g02391 878 FunFam Auxin response factor 741 834 - -
Phac6g02391 878 FunFam Auxin response factor 97 201 - -
Phac6g02391 878 FunFam Auxin response factor 263 335 - -
Phac6g02391 878 CDD B3_DNA 98 199 IPR003340 GO:0003677
Phac6g02391 878 ProSiteProfiles B3 DNA-binding domain profile. 99 201 IPR003340 GO:0003677
Phac6g02391 878 Pfam AUX/IAA family 738 830 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02391 Phac-Chr6 22743444 22749453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02391 22 456 B3 DNA Binding Superfamily AT1G30330 84.703 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac6g02391 B3 1.8e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02391 - - gmx:100796447 1460.28