Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02296 ATGGGGTGTGCGTTTGGGAGAGAGTCTTCGAGGGAGGAGAGGAGAGAGGAAGTGAGAGAGGCAAAAGCTGAGGTGGGTAGAGCAGAGGTTGTTGAGAATGAGAACATTGAGAAAGAGAAGGAGAAGGAGGGTGGAAGAGAAGAGAAGAGGACAAGGGCAAGGGGAGAGAGGAGGCGATCTTCGAAGCCGAAGCCGAATCCGAGATTGAGCAACCCACCTAACCATGTTCATGGTGAGCAGGTTGCAGCAGGGTGGCCCTCTTGGCTCTCTAAGGTTGCTGGTGAAGCCATCAACGGATTGACGCCTCGGAGAGCTGACACCTTTGAGAAGCTTGATAAGATCGGGCAAGGTACATACAGCAATGTTTACAAAGCTAGGGATTCTTTGACGGGAAAAATTGTTGCTCTAAAGAAGGTTCGTTTTGACAATTTAGAGCCTGAAAGTGTGAAGTTCATGGCCAGGGAGATTTTGATTCTCCGTCGTCTAGATCATCCCAATGTCATCAAACTTGAAGGCTTAGTGACTTCTAGAATGTCGTGCAGTTTATATCTTGTATTTGAGTACATGGTGCATGATCTGGCTGGACTTGCCACAAACCCGGCAATTAAGTTCACAGAATCTCAGGTAAAATGTTATATGCATCAGCTATTTTCGGGACTGGAGCACTGTCACAACCGTCATGTGCTGCATCGTGATATAAAGGGGTCAAACCTTCTTATTGATAATGACGGAACACTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTATGATCCTAATCACAAGCACCCTATGACTAGTAGAGTGGTTACATTATGGTATCGGCCTCCAGAACTTCTTCTCGGGGCCACTGAATATAGTGTAGGCGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTATTGGCAGGAAAGCCTATTATGCCTGGTCGAACGGAGGTGGAACAACTACACAAGATATTTAAGCTATGCGGTTCTCCTTCTGATGAATATTGGAAGAAATCAAAGTTGCCACATGCTACCATTTTTAAGCCCCAGCAGTCATACAAGAGATGTATTGCAGAGACATTTAAAGATTTTCCTCCATCATCCCTGCCACTTATTGACACCCTTCTCTCAATTGATCCAGATGAACGTTTGACTGCCACTGCTGCATTGCATAGTGAATTCTTTACAACAAAGCCATATGCCTGTGACCCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAAAGCTAATGTTGATGGTGTCAAGAAATCTCGTCCACGTGAGCGACGGGGAATTCCAGTTCCAGAGGCCAATGCTGAACTGCAAGCAAATATTGATAGACGGCGGCTGATCACACATGCAAATGCTAAGAGCAAGAGTGAAAAGTTTCCTCCTCCCCACCAAGATGGAGCTCTAGGCTATCCACTGGGTTCTTCACATCACATGGATCCAGTTTTTGATCCTCCTGATGTTCCATTTAGTTCCACAAACTTCTCACAACCTAAAGCAAATATCCAAACCTGGTCCGGTCCATTGGTAGATTCTTCTAGTGTGGGCGCACCAAGGAGAAAGAAGAAACATGGAAAGTGA 1635 0.4593 MGCAFGRESSREERREEVREAKAEVGRAEVVENENIEKEKEKEGGREEKRTRARGERRRSSKPKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDSLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTESQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGTLRIADFGLASFYDPNHKHPMTSRVVTLWYRPPELLLGATEYSVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIDTLLSIDPDERLTATAALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANVDGVKKSRPRERRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHMDPVFDPPDVPFSSTNFSQPKANIQTWSGPLVDSSSVGAPRRKKKHGK* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02296 544 MobiDBLite consensus disorder prediction 7 54 - -
Phac6g02296 544 SMART serkin_6 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02296 544 ProSiteProfiles Protein kinase domain profile. 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02296 544 Gene3D Transferase(Phosphotransferase) domain 1 191 431 - -
Phac6g02296 544 Gene3D Phosphorylase Kinase; domain 1 96 190 - -
Phac6g02296 544 MobiDBLite consensus disorder prediction 426 453 - -
Phac6g02296 544 SUPERFAMILY Protein kinase-like (PK-like) 103 398 IPR011009 -
Phac6g02296 544 MobiDBLite consensus disorder prediction 426 449 - -
Phac6g02296 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Phac6g02296 544 MobiDBLite consensus disorder prediction 471 544 - -
Phac6g02296 544 Pfam Protein kinase domain 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02296 544 Coils Coil 28 48 - -
Phac6g02296 544 MobiDBLite consensus disorder prediction 507 529 - -
Phac6g02296 544 FunFam probable serine/threonine-protein kinase At1g54610 191 432 - -
Phac6g02296 544 MobiDBLite consensus disorder prediction 1 79 - -
Phac6g02296 544 PANTHER CELL DIVISION PROTEIN KINASE 106 396 - -
Phac6g02296 544 FunFam probable serine/threonine-protein kinase At1g54610 95 190 - -
Phac6g02296 544 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Phac6g02296 544 CDD STKc_CDK9_like 108 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02296 Phac-Chr6 22095734 22101280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02296 103 430 Core Cell Cycle Gene Families AT5G10270 51.163 2.01e-115 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phac6g02296 Pkinase 3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02296 K08819 - gmx:100779413 947.192