Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02280 ATGGAGTGCAATAAAGAAGAGGCCGTAAGGGCCAAGGAAATTGCTGAACGGAGAATGCAAAACAAAGATTTCAATGGGGCTCGAAAATTTGCTCTTAAGGCTCAGCAGCTATATCCTGATCTGGAGAATATTAATCAAATGCTTATTGTCTGTGATGTGCATTGCTTTGCTGAGCAGAAATTGTTTGGCAATGAGATGGACTGGTATAAAATTCTTCAAATTGAGCTGACGGCTGATGATACAACAATTAGGAAGCAATATAGGAAGTTTGCCCTCCAACTTCATCCCGATAAAAACAAGTTTGCTGGCGCAGAAGCTGCGTTTAAGCTGATTGGGGAAGCTCAAAGAGTTCTTCTGGATGGAGAAAAACGATCTAGGCTTGACATGAATCTGCGCAGGGTTCCAATGAATAGAACTACCATGCAGTCTCATCATCAGCAGAATGTTCAGATGAATTTTAATCCTGTGATGCAAACCAGTGTTAGGCCCAATTTTACAAACTTAAATCCCCATCAGCAACAACAGTCTGGGCAGACATCTCAACAGGGGCTTAATGGTGGCCGCCCTACTTTTTGGACTATGTGCACATTTTGTTCTGTTAGATATGAGTATTATAGGGAAGTTTTAAACAGATCTCTTCGTTGTCAACATTGCAATAGGCCCTTCATTGCATATGATGTTACTATGCAAGGTAGAGTACCAGCAACTAATTCAAGTCAGCAAGCTTTTGGTGTGCAGAACTATAGTCAGAATCATGGCGCTTTCAATGTTGGTGTTGGATCTCAAGGTAATTTTGATACCCGCAGATCAAATATTGAATTACATGAAAACAAAGGTCATACTGTGCATGACCCTGTGAAGCCACGTGGAAAGAGAAGAAGAAAGCGGGCAGCTGAATTCAGTGAAAGTTCTGAATCCGCGGGGACTGATTCTGAATCTGAAGAGGTTATTCATAATGACAATGATGGTTTTTCTACCCACAGAGAAGAGAATCCACGTAGATCTACGCGGCAAAAGCATCATGTTTCCTACAAGGAAAATGTGAGTGATGATGAAGGGACTGAATCTCCATCTGGTGCTGGTGAAGTGGAGCATGGAGGGGCAGCCAAAATTAATGAACAAAATGGTTTGGCTGCTGATAAGAAAGATCAGCGGCAGGTAAAGCAGAAGCAGAGCTTTTATTCTAAAGAGAGCGTTTTAAATATAAAAGAGGAGCTTAAGGAGGTGAGGGAAAAAGAGGCAGTGGGTATCTCAAAGACAGACAAAACTTCAGAGCATTCACCCTCGAAATCAACAAATCCACCAGATAATTTTGTTTATCCAGATGCAGAATTCAGTGACTTTGACAAAGACAAGAAAGAGGGGTCTTTTGCTGCTGGGCAGATTTGGGCTGTTTATGATACTGTAGATGGTATGCCTCGATTCTATGCTTTAATCAGAAAAGTTCTCTCTCCTGGATTCAAGTTGCGGATAACATGGTTTGAACCAGATGCAGAAGAGAAAGATGAAATCCACTGGATAAATGAGCAATTGCCAGTTGCTTGTGGGAAACATAGACTTGGTAATACAGAAAACACTGAAGATCGACTGATGTTTTCTCATCTTATTGTTTGTGAAAAGATTGGCCGCGGTATATATAAAGTATATCCTAGAAAGGGAGAAATTTGGGCTCTTTTTAAAAATTGGGATATCAAATGGCATATGGATGTGGAGTCTCATCGGCAGTATGATTTTGAATTTGTCGAAATCTTATCAGATTACATTGAAGGTGTGGGAGTAGTTGTTGCGTACTTGGCTAAGTTGAAAGGTTTTGTGTCTCTCTTCACTAAAATGGATGGAGGCAAACATACAATTCAAATTCCATCAGCCGAGTTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCAGGAAAGAGTTGGTGTTCCTGTAGGGTCTTGGGAACTTGATCCTGTATCCTTGCCAATGCATATGGAGGAAATTGCTGTTCCTGGAGATTTGGATGTAAATGTCGGTCATGGTCCATCCAGTGGGAATGGCACAAGGTCTTCAGATATGTTGAAATTTGCAAGGAAGGTAGATGCCTCTACTGCAAAGCTTAATTTGGAAAGAAACAATTCTTCAAAGGAGAACAAGGATCCTGTAGATTATACTGGTAGTGATCCTTCAGCCTCAGCTGCAGATGCTTTTGAAATTCCAGATCCTGAGTTCTACAATTTTGATGCTCAGAGGTCCATCGAAAAGTTTCAGGTTGGTCAGATTTGGGCATTTTATGGGGATGAGGATGGACTGCCAAAATACTATGGTCAGATTAAGAGGATTAGGACTAGACCAGAATTTGAGTTGCAAGTTACTTATCTTACTAACTGCTGGCTACCGGAGAATAGTGTCAGATGGGAAGATAAAGACATGCTTATTTCCATTGGCAGATTTAAAATCCAAACGGGTGCCAGTCCCTGTACTTATACTAACACCTATTCTATTTCGCATCAGGTGCAGGCTATTATTGACAGTAAGAAGAAGGAATATGAAATTTTTCCAAGGAAAGGCGAAATTTGGGCATTGTACAAGAATTGGACGACTAAAATAAAACGTTCTGATCTGGAAAATTTGGAGTATGACGTAGTGGAAGTTGTTGGAGAAAATGATTTGTGGATGGATGTTTTACCTTTGGAGTTGGTAAGTGGTTATAATTCAGTTTTCAAGGGCAGATCAAATGCAGGATCAGCTGGGACGATGAAAATATTTTGTAAAGAATTGCTCAGGTTCTCCCACCAAATCCCTGCCTTTAAACTATCAGAAGAACATGGTGGCAGTCTGAGAGGCTTCTGGGAGCTTGATCCGGGAGCACTACCCCTTCATTATTTTAGCAGCAAATAA 2889 0.4081 MECNKEEAVRAKEIAERRMQNKDFNGARKFALKAQQLYPDLENINQMLIVCDVHCFAEQKLFGNEMDWYKILQIELTADDTTIRKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDGEKRSRLDMNLRRVPMNRTTMQSHHQQNVQMNFNPVMQTSVRPNFTNLNPHQQQQSGQTSQQGLNGGRPTFWTMCTFCSVRYEYYREVLNRSLRCQHCNRPFIAYDVTMQGRVPATNSSQQAFGVQNYSQNHGAFNVGVGSQGNFDTRRSNIELHENKGHTVHDPVKPRGKRRRKRAAEFSESSESAGTDSESEEVIHNDNDGFSTHREENPRRSTRQKHHVSYKENVSDDEGTESPSGAGEVEHGGAAKINEQNGLAADKKDQRQVKQKQSFYSKESVLNIKEELKEVREKEAVGISKTDKTSEHSPSKSTNPPDNFVYPDAEFSDFDKDKKEGSFAAGQIWAVYDTVDGMPRFYALIRKVLSPGFKLRITWFEPDAEEKDEIHWINEQLPVACGKHRLGNTENTEDRLMFSHLIVCEKIGRGIYKVYPRKGEIWALFKNWDIKWHMDVESHRQYDFEFVEILSDYIEGVGVVVAYLAKLKGFVSLFTKMDGGKHTIQIPSAELFRFSHRVPSFKMTGQERVGVPVGSWELDPVSLPMHMEEIAVPGDLDVNVGHGPSSGNGTRSSDMLKFARKVDASTAKLNLERNNSSKENKDPVDYTGSDPSASAADAFEIPDPEFYNFDAQRSIEKFQVGQIWAFYGDEDGLPKYYGQIKRIRTRPEFELQVTYLTNCWLPENSVRWEDKDMLISIGRFKIQTGASPCTYTNTYSISHQVQAIIDSKKKEYEIFPRKGEIWALYKNWTTKIKRSDLENLEYDVVEVVGENDLWMDVLPLELVSGYNSVFKGRSNAGSAGTMKIFCKELLRFSHQIPAFKLSEEHGGSLRGFWELDPGALPLHYFSSK* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02280 962 SMART dnaj_3 66 123 IPR001623 -
Phac6g02280 962 MobiDBLite consensus disorder prediction 311 352 - -
Phac6g02280 962 PRINTS DnaJ domain signature 103 123 IPR001623 -
Phac6g02280 962 PRINTS DnaJ domain signature 87 102 IPR001623 -
Phac6g02280 962 PRINTS DnaJ domain signature 69 87 IPR001623 -
Phac6g02280 962 MobiDBLite consensus disorder prediction 376 390 - -
Phac6g02280 962 Gene3D DnaJ domain 64 181 IPR036869 -
Phac6g02280 962 MobiDBLite consensus disorder prediction 411 426 - -
Phac6g02280 962 MobiDBLite consensus disorder prediction 411 443 - -
Phac6g02280 962 CDD DnaJ 67 120 IPR001623 -
Phac6g02280 962 MobiDBLite consensus disorder prediction 373 392 - -
Phac6g02280 962 Pfam Domain of unknown function (DUF3444) 436 641 IPR024593 -
Phac6g02280 962 Pfam Domain of unknown function (DUF3444) 732 938 IPR024593 -
Phac6g02280 962 MobiDBLite consensus disorder prediction 273 364 - -
Phac6g02280 962 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 697 - -
Phac6g02280 962 MobiDBLite consensus disorder prediction 703 731 - -
Phac6g02280 962 SUPERFAMILY Chaperone J-domain 64 142 IPR036869 -
Phac6g02280 962 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Phac6g02280 962 Pfam DnaJ domain 67 128 IPR001623 -
Phac6g02280 962 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02280 Phac-Chr6 22018132 22021020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02280 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.498 1.22e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02280 - - gmx:100779228 1566.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02280 6 22018132 22021020 Phac6g02280 6 22018132 22021020 ECH
Phac3g01558 3 17898781 17902911 Phac6g02280 6 22018132 22021020 PCT