Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02277 ATGGCCTCCATATCTGAAATTGCATGGAAAAGATGCACTTCTCTTCCTGTTACACCTGCATCAAATCTGTCTCCTTCAGTTGCTACACCCATTTCTGCAAGGACATATACTGAACAAATTAAGCCACATAAAGAGGTTGATCGTTCTAAGGTTTCAAGGTCCCTTTCTGTACCTGGACGAAATGTTGTTATTGTAAGATCTGTCTCTTTTTCTACTCGTAGTGAACAGGAGCAACAAGATCCAAATGATGATCAAATAACTCCTGTGCCAGTAGAAGTTACTTCCGATGAGGAAATTCCTGAAGAGGAAGCAGTGTGCAGAATATGTTTTGATGTGTGTGATGAAAGGAATACCTTTAAAATGGAATGCAGTTGCAAAGGTGACCTGAGACTGGTACACGAAGAATGTTTAATTAAATGGTTTAGCACAAAAAGAGACAAGAAATGTGATGTATGTAGGCAAGAGGTTCAGAATTTACCTGTAACTTTGCTTCGTGTGACAAGCTCGATTCAACGACAAAACAGACAGACGCAAGGTCAGCAGAACCTACATCCAGAGTCAATAAGCGCATGGCAAGACTTTGTGGTGCTTGTCCTGATCAGCACAATATGCTACTTTTTCTTCCTTGAACAGCTACTGCTTCCTGAATTGAAGACTCAAGCTATTATTATTTCGGCACCATTTGCCTTTACCTTGGGCCTCCTAGCTTCTATTTTTGCAGTCATCCTGGCAATTAAGGAGTATATATGGACATATGCTGCTCTCGAGTTTGCCCTTGTGGCTTTTACTGTGCATCTATTTTATACAGTGTTGCATCTGATGGCCATATATGCCATACTACTTTCATCAGTTTTGGGTTTTGGAATTGCTATGACCATCAACTACGCATATATCCAGTTTGTCACTTGGAGGCTTCAAGTCTCTCATGATGATCACCCAGTATGA 945 0.4074 MASISEIAWKRCTSLPVTPASNLSPSVATPISARTYTEQIKPHKEVDRSKVSRSLSVPGRNVVIVRSVSFSTRSEQEQQDPNDDQITPVPVEVTSDEEIPEEEAVCRICFDVCDERNTFKMECSCKGDLRLVHEECLIKWFSTKRDKKCDVCRQEVQNLPVTLLRVTSSIQRQNRQTQGQQNLHPESISAWQDFVVLVLISTICYFFFLEQLLLPELKTQAIIISAPFAFTLGLLASIFAVILAIKEYIWTYAALEFALVAFTVHLFYTVLHLMAIYAILLSSVLGFGIAMTINYAYIQFVTWRLQVSHDDHPV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02277 314 ProSiteProfiles Zinc finger RING-type profile. 106 153 IPR001841 -
Phac6g02277 314 CDD RING_CH-C4HC3_MARCH 106 153 - -
Phac6g02277 314 ProSiteProfiles Zinc finger RING-CH-type profile. 98 159 IPR011016 GO:0008270
Phac6g02277 314 Pfam RING-variant domain 106 152 IPR011016 GO:0008270
Phac6g02277 314 SUPERFAMILY RING/U-box 102 156 - -
Phac6g02277 314 PANTHER OS02G0165000 PROTEIN 4 308 - -
Phac6g02277 314 SMART ringv_2 105 153 IPR011016 GO:0008270
Phac6g02277 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 161 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02277 Phac-Chr6 21994995 21999876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02277 44 209 C3H Transcription Factor Family AT2G37950 26.667 2.21e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02277 - - gmx:100527094 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02277 6 21994995 21999876 Phac6g02277 6 21994995 21999876 ECH