Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02261 ATGAACGATGAACGAGAACCAACAGCTTCCCCGAGCAATGGCGTCCACAAGATAGATAAAAAACAAATAGTTGAAAGGGAGAAATCTCTTTTTAAAGGGAGACGTCCACGACCTGGGTTTTCTGATTCATTCTCAAGTATAGAATTGGAAACTTTAGACATTGAAGAGGGAGGCCCACCTGAGCACTCTCCTAGGAGTCAAGGGTCTGAAACCCCAAGTTCAAGAACCAGCACTTCTGATTCGGAGTGTCAGGGGTCTTTAGTAGGAAATTCACCTAATTCTAATAACCAATGGCGTGGTTTCTTTAAGTTACTGAAGAAAGGATCCCAAATGCCTTTCCAAACTTTTCATCCCCTTAAAAATGTTCCCAAACTGACAAGAAGAAAAAGCAAGAGAATCAGGGAGGACCTGATTCCATCTTTGAATTCTCCAGCTCTTCAGTCATCTTTTGACACTGAGTTTGGCTGCTTCAAATCTTCCTGGAAAAACTTCACTCTTGCAGAGATCTTGACCGCAACAGACGAATTTAGCCAAGTTAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTATTTAGGCAAATTGGAAGATGGAAACTTTGTTGCCATTAAACGGTTGACAAGAGGGAACCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGAATTATAGTACATGTGGATCACCCCAATATAGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCTTGTCATCTATACTTTATGGACCTAGAGAGAAACTAAATTGGAGACTCAGATATAAGATTATTTTGGGGACTGCTGAGGGCCTCCGCTATCTGCATGAAGAATGTCAAAGAAGGATCATTCACAAAGACATTAAGGCTTCTAATATTTTGCTCTCGGAGGATTTTGAGCCCCAGATATCCGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACATTCGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGTGTGCTATTATTGGAGCTCATTACTGGTCGACAAGCTTTGGATAGCTCACAGAGAAGCCTGGTGATGTGGGCAAAACCTCTGCTATCTGCAAACAACATCAAAGCCCTAGTCGATCCAGTTTTGGTTGATGCTTACGATGAAGAGCAGATGAAACTTGTAACCTTAACAGCTTCTCTATGTGTGGACCAGTCTTCGATTCAGCGACCAGATATGAGCCAGGTGTTGGAGATACTAAGAGGGGAAGAAGAAATCCTAAGCATCATGAAAGAACGGTCCAAGGTAAAACTTCAGAGGACATACTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACCAAGTTTTTGAGTGAGAGGGATCGACATATGGAGACTATTCTAGGATCAGTTACAGACGAAGATAAATAG 1497 0.4208 MNDEREPTASPSNGVHKIDKKQIVEREKSLFKGRRPRPGFSDSFSSIELETLDIEEGGPPEHSPRSQGSETPSSRTSTSDSECQGSLVGNSPNSNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSFDTEFGCFKSSWKNFTLAEILTATDEFSQVNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWRLRYKIILGTAEGLRYLHEECQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQRSLVMWAKPLLSANNIKALVDPVLVDAYDEEQMKLVTLTASLCVDQSSIQRPDMSQVLEILRGEEEILSIMKERSKVKLQRTYSEELLDAEEYNSTKFLSERDRHMETILGSVTDEDK* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02261 498 MobiDBLite consensus disorder prediction 64 94 - -
Phac6g02261 498 PANTHER OS08G0249100 PROTEIN 50 475 IPR046958 -
Phac6g02261 498 Gene3D Phosphorylase Kinase; domain 1 140 250 - -
Phac6g02261 498 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 253 455 - -
Phac6g02261 498 Gene3D Transferase(Phosphotransferase) domain 1 253 465 - -
Phac6g02261 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Phac6g02261 498 MobiDBLite consensus disorder prediction 1 94 - -
Phac6g02261 498 MobiDBLite consensus disorder prediction 18 35 - -
Phac6g02261 498 SUPERFAMILY Protein kinase-like (PK-like) 158 441 IPR011009 -
Phac6g02261 498 ProSiteProfiles Protein kinase domain profile. 176 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02261 498 Pfam Protein tyrosine and serine/threonine kinase 180 440 IPR001245 GO:0004672|GO:0006468
Phac6g02261 498 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 146 250 - -
Phac6g02261 498 ProSitePatterns Protein kinases ATP-binding region signature. 182 204 IPR017441 GO:0005524
Phac6g02261 498 SMART serkin_6 176 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02261 Phac-Chr6 21898911 21902893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02261 147 447 Receptor kinase-like Gene Family AT1G53420 39.159 2.14e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac6g02261 PK_Tyr_Ser-Thr 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02261 - - gmx:102670300 858.981