Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02260 ATGCTGAAAATGAATACCATATTAGAATTGGAAACTTTAGACATTGAAGAGGGAGGCCCACCTGAGCACTCTCCTAGGAGTCAAGGGTCTGAAACCCCAAGTTCAAGAACCAGCACTTCTGATTCGGAGTGTCAGGGGTCTTTAGTAGGAAATTCACCTAATTCTAATAACCAATGGCGTGGTTTCTTTAAGTTACTGAAGAAAGGATCCCAAATGCCTTTCCAAACTTTTCATCCCCTTAAAAATGTTCCCAAACTGACAAGAAGAAAAAGCAAGAGAATCAGGGAGGACCTGATTCCATCTTTGAATTCTCCAGCTCTTCAGTCATCTTTTGACACTGAGTTTGGCTGCTTCAAATCTTCCTGGAAAAACTTCACTCTTGCAGAGATCTTGACCGCAACAGACGAATTTAGCCAAGTTAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTATTTAGGCAAATTGGAAGATGGAAACTTTGTTGCCATTAAACGGTTGACAAGAGGGAACCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGAATTATAGTACATGTGGATCACCCCAATATAGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCTTGTCATCTATACTTTATGGACCTAGAGAGAAACTAAATTGGAGACTCAGATATAAGATTATTTTGGGGACTGCTGAGGGCCTCCGCTATCTGCATGAAGAATGTCAAAGAAGGATCATTCACAAAGACATTAAGGCTTCTAATATTTTGCTCTCGGAGGATTTTGAGCCCCAGATATCCGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACATTCGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGTGTGCTATTATTGGAGCTCATTACTGGTCGACAAGCTTTGGATAGCTCACAGAGAAGCCTGGTGATGTGGGCAAAACCTCTGCTATCTGCAAACAACATCAAAGCCCTAGTCGATCCAGTTTTGGTTGATGCTTACGATGAAGAGCAGATGAAACTTGTAACCTTAACAGCTTCTCTATGTGTGGACCAGTCTTCGATTCAGCGACCAGATATGAGCCAGGTGTTGGAGATACTAAGAGGGGAAGAAGAAATCCTAAGCATCATGAAAGAACGGTCCAAGGTAAAACTTCAGAGGACATACTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACCAAGTTTTTGAGTGAGAGGGATCGACATATGGAGACTATTCTAGGATCAGTTACAGACGAAGATAAATAG 1380 0.4188 MLKMNTILELETLDIEEGGPPEHSPRSQGSETPSSRTSTSDSECQGSLVGNSPNSNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSFDTEFGCFKSSWKNFTLAEILTATDEFSQVNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWRLRYKIILGTAEGLRYLHEECQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQRSLVMWAKPLLSANNIKALVDPVLVDAYDEEQMKLVTLTASLCVDQSSIQRPDMSQVLEILRGEEEILSIMKERSKVKLQRTYSEELLDAEEYNSTKFLSERDRHMETILGSVTDEDK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02260 459 Gene3D Phosphorylase Kinase; domain 1 101 211 - -
Phac6g02260 459 MobiDBLite consensus disorder prediction 11 55 - -
Phac6g02260 459 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 107 211 - -
Phac6g02260 459 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 214 416 - -
Phac6g02260 459 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524
Phac6g02260 459 SMART serkin_6 137 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02260 459 ProSiteProfiles Protein kinase domain profile. 137 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02260 459 Pfam Protein tyrosine and serine/threonine kinase 141 401 IPR001245 GO:0004672|GO:0006468
Phac6g02260 459 Gene3D Transferase(Phosphotransferase) domain 1 214 426 - -
Phac6g02260 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Phac6g02260 459 MobiDBLite consensus disorder prediction 25 55 - -
Phac6g02260 459 SUPERFAMILY Protein kinase-like (PK-like) 119 402 IPR011009 -
Phac6g02260 459 PANTHER OS08G0249100 PROTEIN 33 436 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02260 Phac-Chr6 21898911 21902893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02260 108 408 Receptor kinase-like Gene Family AT1G53420 39.159 3.50e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac6g02260 PK_Tyr_Ser-Thr 9.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02260 - - gmx:102670300 805.823