Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02259 ATGAACGATGAACGAGAACCAACAGCTTCCCCGAGCAATGGCGTCCACAAGATAGATAAAAAACAAATAGTTGAAAGGGAGAAATCTCTTTTTAAAGGGAGACGTCCACGACCTGGGTTTTCTGATTCATTCTCAAGTATAGCTCTTCAGTCATCTTTTGACACTGAGTTTGGCTGCTTCAAATCTTCCTGGAAAAACTTCACTCTTGCAGAGATCTTGACCGCAACAGACGAATTTAGCCAAGTTAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTATTTAGGCAAATTGGAAGATGGAAACTTTGTTGCCATTAAACGGTTGACAAGAGGGAACCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGAATTATAGTACATGTGGATCACCCCAATATAGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCTTGTCATCTATACTTTATGGACCTAGAGAGAAACTAAATTGGAGACTCAGATATAAGATTATTTTGGGGACTGCTGAGGGCCTCCGCTATCTGCATGAAGAATGTCAAAGAAGGATCATTCACAAAGACATTAAGGCTTCTAATATTTTGCTCTCGGAGGATTTTGAGCCCCAGATATCCGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACATTCGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGTGTGCTATTATTGGAGCTCATTACTGGTCGACAAGCTTTGGATAGCTCACAGAGAAGCCTGGTGATGTGGGCAAAACCTCTGCTATCTGCAAACAACATCAAAGCCCTAGTCGATCCAGTTTTGGTTGATGCTTACGATGAAGAGCAGATGAAACTTGTAACCTTAACAGCTTCTCTATGTGTGGACCAGTCTTCGATTCAGCGACCAGATATGAGCCAGGTGTTGGAGATACTAAGAGGGGAAGAAGAAATCCTAAGCATCATGAAAGAACGGTCCAAGGTAAAACTTCAGAGGACATACTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACCAAGTTTTTGAGTGAGAGGGATCGACATATGGAGACTATTCTAGGATCAGTTACAGACGAAGATAAATAG 1206 0.4196 MNDEREPTASPSNGVHKIDKKQIVEREKSLFKGRRPRPGFSDSFSSIALQSSFDTEFGCFKSSWKNFTLAEILTATDEFSQVNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWRLRYKIILGTAEGLRYLHEECQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQRSLVMWAKPLLSANNIKALVDPVLVDAYDEEQMKLVTLTASLCVDQSSIQRPDMSQVLEILRGEEEILSIMKERSKVKLQRTYSEELLDAEEYNSTKFLSERDRHMETILGSVTDEDK* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02259 401 ProSiteProfiles Protein kinase domain profile. 79 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02259 401 SMART serkin_6 79 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02259 401 SUPERFAMILY Protein kinase-like (PK-like) 61 344 IPR011009 -
Phac6g02259 401 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 49 153 - -
Phac6g02259 401 Pfam Protein tyrosine and serine/threonine kinase 83 343 IPR001245 GO:0004672|GO:0006468
Phac6g02259 401 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Phac6g02259 401 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 156 358 - -
Phac6g02259 401 Gene3D Phosphorylase Kinase; domain 1 42 153 - -
Phac6g02259 401 Gene3D Transferase(Phosphotransferase) domain 1 156 368 - -
Phac6g02259 401 PANTHER OS08G0249100 PROTEIN 46 378 IPR046958 -
Phac6g02259 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02259 Phac-Chr6 21898911 21902893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02259 50 350 Receptor kinase-like Gene Family AT1G53420 39.159 1.07e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac6g02259 PK_Tyr_Ser-Thr 6.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02259 - - gmx:102670300 658.292