Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02231 ATGTCCATCGATCTTTCGACTCTCCCGAAGGAAGCTTTTGTATTTTTTAGCTGTCTGCTGGTGTTGTTACTTGTATGGTATTGGATAGTATGGCTGATGTTAGCAGAGGAGGAAGAAGAAGAAAACAGAGAGATTGGAGGAGACATTGAGTCTGGTGCTGCACACACTTCTCGCCCACAAACAAGGAATGTTAGATTTGTGAATGCAAGAAGTGGAATAGTACCTTGGCATCGAACACTTTTCACACCCAAAACGCACATTGCTAACCTTGCCGTCAGAGCCTTGCCTCCTGTTAAACCCTTCCAAGAGGATCAAACCACTCCCTCTCAAACTCAATGTCCCATTTGCATCCAACAATTTACCAATGGTGATTTAATTCAACCTTTTGGACTCTGTTTTCATGAATTTCACCCCTCTTGCATTCATTCTTGGCTACTTCATGGAAAGATCAGTTGTCCAGTTTGTCGCATGGAGTTGCCGATTACTCTCCCCCGCTGA 498 0.4398 MSIDLSTLPKEAFVFFSCLLVLLLVWYWIVWLMLAEEEEEENREIGGDIESGAAHTSRPQTRNVRFVNARSGIVPWHRTLFTPKTHIANLAVRALPPVKPFQEDQTTPSQTQCPICIQQFTNGDLIQPFGLCFHEFHPSCIHSWLLHGKISCPVCRMELPITLPR* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02231 165 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 15 157 IPR044675 -
Phac6g02231 165 Pfam Ring finger domain 112 156 IPR001841 -
Phac6g02231 165 SUPERFAMILY RING/U-box 112 162 - -
Phac6g02231 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 161 IPR013083 -
Phac6g02231 165 ProSiteProfiles Zinc finger RING-type profile. 113 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02231 Phac-Chr6 21778695 21779192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02231 25 162 C3H Transcription Factor Family AT1G26800 27.083 5.89e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02231 - K22378 aprc:113865236 118.627