Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02190 ATGGGTATATCATGGAGTGGCAGAAGAAGAAACAATTACATCCAAAATCCACCGCCTCCACTCCCACCTCCCCCTTACTATTACCCTCCCCAATCCCACCACCTTCCCCCTCCGCCGCCACCGCAGGGCTACTTCCTCCCTTCCACAACCACTTACGCCCCACACAGCAACAACTATGCCGCTCCCCCTCCCTTGGCTCCACCACCACAGCCGCCACCGCCGCAGACCCATTCCATCTCCTTCTATTACCCCAACCAGAGTGCCTATCCCAACTACGCCAATTCCGCGCCCAATCGCCTTCACTACCAACCTTTCTACCACCCTCAACCTAGCGTGTGGCCCGCGGCCACTGGCGCCTCTGACTCCACTCCTCCGCCCTATGTCGATCACCAGGCCGCGAAGAAGATAAGAAACTATGTTAACGTCCACAAAGACACCCTGCGCCTCGAGGTTGACCAGGAAAACCCCGATCATCATCTCATTTCCTTCGTTTTCGATGCTGTCTACGATGGCAGCATTACTGTCTTCTACTTTGCCAAAGAAGAAGAAAAATGTAGATTTGTTCCATTATTTCCCGATGCATTTCAGCCAGTCAGAATACCCTTTCAGAAAGGAGTTGGCCAGACATTTTCCCAGCCTCCAGGAACAGGAATTGACCTAGGCTTCTTTGAGTTGGATGATCTTTCAAAGCCCTCACCTGAAGAAGATGTCTTTCCTCTTGTAATATGTGCCGAAACAAGTTTGAAAACACCCTCAGAAGATGAAACTTTGGGTGATTCCGTGCTAGATGCATCACCTCACATGCAAATAACTCAAGGTGTCTTAGAGAAAAGTAATGGTGCTGGTCCTTTCCTGATAAAAGTAGTAAGGCAGATTTTGTGGATTGATGGTATTCGATATGAGTTGAGAGAGTTATTTGGAATAGCAAGCTCATCCGCAGCTGATTTTGACGACAATGATCCCGGGAAGGAGTGTGTCATATGCATGACTGAACCAAAGGATACAGCTGTCTTACCTTGTCGACATATGGTAAGATTTCATTTCAAATGTGCTTATATGTGGAGTAGATAA 1071 0.4846 MGISWSGRRRNNYIQNPPPPLPPPPYYYPPQSHHLPPPPPPQGYFLPSTTTYAPHSNNYAAPPPLAPPPQPPPPQTHSISFYYPNQSAYPNYANSAPNRLHYQPFYHPQPSVWPAATGASDSTPPPYVDHQAAKKIRNYVNVHKDTLRLEVDQENPDHHLISFVFDAVYDGSITVFYFAKEEEKCRFVPLFPDAFQPVRIPFQKGVGQTFSQPPGTGIDLGFFELDDLSKPSPEEDVFPLVICAETSLKTPSEDETLGDSVLDASPHMQITQGVLEKSNGAGPFLIKVVRQILWIDGIRYELRELFGIASSSAADFDDNDPGKECVICMTEPKDTAVLPCRHMVRFHFKCAYMWSR* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02190 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 308 356 IPR013083 -
Phac6g02190 356 MobiDBLite consensus disorder prediction 60 78 - -
Phac6g02190 356 MobiDBLite consensus disorder prediction 15 45 - -
Phac6g02190 356 PANTHER MAHOGUNIN 60 343 IPR045194 GO:0061630
Phac6g02190 356 MobiDBLite consensus disorder prediction 1 80 - -
Phac6g02190 356 SUPERFAMILY RING/U-box 318 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02190 Phac-Chr6 21452131 21456605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02190 127 344 C3H Transcription Factor Family AT3G06140 59.361 4.88e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02190 - - vra:106775674 568.155