Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02175 ATGGATCAAAACCAGCATGGTGAAGCAGGAGGAAAGGGTCCAGCTCCAGCAGAAGAAGAAGCTGAAGGCATGAACCAATATGAATCCAACCCCACAGCACCCAACACCAATCCTCCAACTCAGACCGTTGGTGTTCCTGGAGGGAATCGTTATGATCGGCAATGCATACAGCAGCAGCAGCAAGAAAAAATGCAGCAAAGGGTTAACAGCTTCTGGGCAAGACAGTTGAAGGAAATTGAGGAGAGCACTGATTTGAAGAGTCACAGCTTGCCTCTGTCGAAGATTAAGAAGATCATGAAGTTTGATGAGGATGTGAAGATGGTGTCAACTGAGGCTACTATGCTGTTAGCCAAGGCCTGTGAACTGTTCATTATGGAGCTCACAATGAGGGCTTGGGCGAACGTTGAGGATGATAAAAGGAGGATAATTCAGAAGACTGATGTTGCATCTGCAATCTCAATGAGTGATATGTTTGATTTTCTTGTTGACATTGTTCCCAGGGATGACACAGTCACAGTGGGACATCAACTGCTTGCAAGCATTGCTCCAACACCAAATCAGAATGCTCCTTACCCTTATATGTCAATTCCTCAGCATGTTGCAGGCCCACCGAAACCATTTGCTGCTCCAACAAATGCTCCTGAAGATGCTGCAAATCCATCCTGTTCCAACTCCGATCCCACCCCAAATGAACAAGACACTTCCAATTCGGATGATCATTGA 723 0.4606 MDQNQHGEAGGKGPAPAEEEAEGMNQYESNPTAPNTNPPTQTVGVPGGNRYDRQCIQQQQQEKMQQRVNSFWARQLKEIEESTDLKSHSLPLSKIKKIMKFDEDVKMVSTEATMLLAKACELFIMELTMRAWANVEDDKRRIIQKTDVASAISMSDMFDFLVDIVPRDDTVTVGHQLLASIAPTPNQNAPYPYMSIPQHVAGPPKPFAAPTNAPEDAANPSCSNSDPTPNEQDTSNSDDH* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02175 240 MobiDBLite consensus disorder prediction 216 232 - -
Phac6g02175 240 Gene3D Histone, subunit A 51 167 IPR009072 GO:0046982
Phac6g02175 240 MobiDBLite consensus disorder prediction 25 44 - -
Phac6g02175 240 SUPERFAMILY Histone-fold 34 161 IPR009072 GO:0046982
Phac6g02175 240 MobiDBLite consensus disorder prediction 196 240 - -
Phac6g02175 240 MobiDBLite consensus disorder prediction 1 50 - -
Phac6g02175 240 Pfam Core histone H2A/H2B/H3/H4 28 152 IPR007125 GO:0003677
Phac6g02175 240 FunFam Nuclear transcription factor Y subunit gamma 54 167 - -
Phac6g02175 240 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 52 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02175 Phac-Chr6 21329256 21331940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02175 1 201 CCAAT-HAP5 Transcription Factor Family AT1G08970 43.961 1.41e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phac6g02175 Histone 1e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02175 K08066 - vum:124832126 208.379