Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02174 ATGGATCAAAAGAAGGGTGGTGAAGCAGAAAAAGAAGGACGCGGCAAGAGCAAAATTGAATCTGACCCCATGATGGCTCCTCCTCCCAGTCCTCTAGCTCTGACTATTGGTCCTTCTGTCCCTTCATCCCAGCCACAGCTGCTGCCACGAGAATCATTGGAGCAGAAACTGGAGAACTTCTGGGCAGAAAAACGGCAGGAAGTTAAGGAGACCTCTGATTTCAAGAATCACTTCTTGCCTTTGGCTAGGATTAAGAGGATAATGAAGGCTGATGGGGATGTGAAAATGGTGTCAGCTGAGGCTCCTGTGGTGTTTGCCAAGGCTTGTGAAATGTTCATTATGGAGCTCACAATGAGGGCATGGGATAATGCTGAGGAGAACAAGAGGAAGATACTTGGTAAGAGTGACATTGCATCTGCAATGTCAAAGTCTGATATGTATGATTTTCTCGTTGATATTGTCCCCAGGGAAGACACAAGGCCTCATCCAGTGTTTGAAGCCATTGCTCCAACCTATCCTATGCCACCTCATCAACATGCTGCAGACCCACAATCTGGTGCTCCAACAATGCTCATGGGAATGCCCATTCTTGATCAAAATCATCCTGAGCTGCAAACCCTTCCTTCTCCAACTCCAATGTCGCCCAACCCTGAACAAGAAAACAACCATGCTCCTGATTCAGATGACTGA 690 0.471 MDQKKGGEAEKEGRGKSKIESDPMMAPPPSPLALTIGPSVPSSQPQLLPRESLEQKLENFWAEKRQEVKETSDFKNHFLPLARIKRIMKADGDVKMVSAEAPVVFAKACEMFIMELTMRAWDNAEENKRKILGKSDIASAMSKSDMYDFLVDIVPREDTRPHPVFEAIAPTYPMPPHQHAADPQSGAPTMLMGMPILDQNHPELQTLPSPTPMSPNPEQENNHAPDSDD* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02174 229 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 51 185 - -
Phac6g02174 229 FunFam Nuclear transcription factor Y subunit gamma 44 156 - -
Phac6g02174 229 MobiDBLite consensus disorder prediction 1 48 - -
Phac6g02174 229 SUPERFAMILY Histone-fold 64 150 IPR009072 GO:0046982
Phac6g02174 229 MobiDBLite consensus disorder prediction 197 229 - -
Phac6g02174 229 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 78 141 IPR003958 -
Phac6g02174 229 Gene3D Histone, subunit A 45 156 IPR009072 GO:0046982
Phac6g02174 229 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02174 Phac-Chr6 21314332 21322463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02174 59 221 CCAAT-HAP5 Transcription Factor Family AT1G54830 50.292 6.24e-51 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phac6g02174 CBFD_NFYB_HMF 2.9e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02174 K08066 - var:108342662 214.927