Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02164 ATGGAAAACTTCATCTCTTCATCTTCTTCTCTGTCACTCATTCCATCCATTTCAGCTCCATCTTCTTCTGCACCTTTCGACGACTCTTTCGAAGACTCCTGCAGTATATGCCTGGAGCCCTTCACCTTTCACGAACCATCCACTGTTACCAGTTGCAAGCATGAATATCATCTGCATTGCATTCTTGAGTGGTCACAAAGAAGCCAAGAATGCCCAATTTGTTGGCAATCTCTTGCTTTGAAAGACCCTGCCAGCCAAGAGCTTCTAGCTGCAGTTGAAGATGAAAAACGCATGAGATCAAGAAACACGACTACATTTCGTGCTCCCCTTGAACAGCTTAATGATGCCTATGATGATGATTCATTCTCAGATGACTCTGATTCTGATGACCAGATTATGAGGCGCTTAGTTGCTGCTGCAAATAGAGCTCGTCTTGTTCAGAGACAGGAAAGGAATAGATCACCTGGTGCTGGTCCATCAGATGTTCTTGATATTAACTCTTCCATACATGTATCTGGGGTGCAAACAACACTTGCAACTTCACCATCTTGGGGTAGTTTGTCTGCCTCTGGTGTAACCTCTACATTTAATAGTCAACCTCCGGTTTTAAACACTACACCCGAGAGTGCAAGCCAACCAAAGACTTCTGAGATGTTTTCCTTCCCAGAATCCTTCAAATCCAAATTTTCTGCTGCTTCAACCAGATATAAGGAATCAATTTCAAAAGGTACACGGGGCCTCAAAGAGAAGTTACTTGCCCATAATGTCTCAGTAAAAGAGCTGAGTAAAGGTGTTCAGCGAGAGATGAATGCAGGCATTGCTGGAGTTGCACGGATGATTGAACGCCTTGATCTTTCAAAACGGTCCAGTTCTCCTATCATTCCAATCCATAGTGAAGGAACTTCAGACTTCCCAAAAGAAGGGAAGAAGTATGTTGGAGAGAATGGCATTGGGGGTTCTCCTAGTAAAGAGAGTGAAGGTGCAGTTCATGATGTTAGTTCGGATGTTCCCCCATTTACTACTAACACGCAATCTTTTCGAATGGAAATTCCTCCATATGTTCAGGGTGGACATGATAAGCTATGA 1086 0.4346 MENFISSSSSLSLIPSISAPSSSAPFDDSFEDSCSICLEPFTFHEPSTVTSCKHEYHLHCILEWSQRSQECPICWQSLALKDPASQELLAAVEDEKRMRSRNTTTFRAPLEQLNDAYDDDSFSDDSDSDDQIMRRLVAAANRARLVQRQERNRSPGAGPSDVLDINSSIHVSGVQTTLATSPSWGSLSASGVTSTFNSQPPVLNTTPESASQPKTSEMFSFPESFKSKFSAASTRYKESISKGTRGLKEKLLAHNVSVKELSKGVQREMNAGIAGVARMIERLDLSKRSSSPIIPIHSEGTSDFPKEGKKYVGENGIGGSPSKESEGAVHDVSSDVPPFTTNTQSFRMEIPPYVQGGHDKL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02164 361 MobiDBLite consensus disorder prediction 335 349 - -
Phac6g02164 361 FunFam E3 ubiquitin-protein ligase RHF1A 19 86 - -
Phac6g02164 361 SMART ring_2 34 74 IPR001841 -
Phac6g02164 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 106 IPR013083 -
Phac6g02164 361 MobiDBLite consensus disorder prediction 189 218 - -
Phac6g02164 361 MobiDBLite consensus disorder prediction 291 361 - -
Phac6g02164 361 SUPERFAMILY RING/U-box 31 81 - -
Phac6g02164 361 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 23 83 - -
Phac6g02164 361 Pfam Ring finger domain 32 74 IPR001841 -
Phac6g02164 361 ProSiteProfiles Zinc finger RING-type profile. 34 74 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02164 Phac-Chr6 21272221 21275031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02164 28 82 C3H Transcription Factor Family AT4G00335 45.455 3.13e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02164 K19043 - gmx:100805449 477.248