Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02123 ATGAAGCCTCAAGCTTCTGAGACCGATCTCTGCTCTCTCAAACGCTCCCCACCTTCAACCATGTCTTCTTCTTCCTCTTCTCTCATCACCACTCTTGTTGATCATAATAATAACCCTTCACACCCTCCTCAGCTAAGACCTCCTCGCCGCCGTTTTGCTTCTCACCACCTTCCTGAGATAAGCCTCAAAACTCCTATGGTTAGGCCTTATGTTCGATCAAAAATGCCCAGGCTTCGTTGGACACCAGATCTCCATCGCTGCTTCGTGCATGCAGTTCAAAGACTTGGAGGAGAAGACAGGGCCACACCAAAGTTGGTTTTACAGCTCATGAATGTAAAGGGGCTTACCATATCTCATGTCAAAAGCCACCTTCAGATGTACAGGAGCATGAAGCACGAGCAGATGAGTCAAGGTGCAAATAAGAATGATGTGGCTCCAGAGTTTCCAGCTTCCACATTCTCAACTCTGGGCCCAAGGTACGCCCAGCAGAATCCTCACCAAAGAAGCTGCACGGAAGACCTTGTTCCAATCCATGCTCAGTGGAATGATTACGAGGAAGGGAGTTACAGTGGAAAGCAAGGGGGTAAATCGATTATAGGTTGTAACGGCAATGAAGAGACGATGCACTCCTACATCATCTTCGAGGGTCTTCTCAGTAACCAGACTGTTGAAGAGGATAAAATTGCTCCTGAAAAGGTGTCACTAGAGGGTGCCACCGGATACGAAAGAGAGCATGAAAGATTCCAAGACAGAACTACTAGTGCCATAGGAGGAGGAGGAGGAGAGAGAGAGGGTGAACGCACAGTGTCCTTATCAATGAGTTCCAGGGTTAATTCACATTCATTCTTCAATCGCAGCCACACTGGTCCAGATGCCAATGATGTCTCTCTTGAGCTCACGCTCTCTTAG 909 0.4785 MKPQASETDLCSLKRSPPSTMSSSSSSLITTLVDHNNNPSHPPQLRPPRRRFASHHLPEISLKTPMVRPYVRSKMPRLRWTPDLHRCFVHAVQRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQMYRSMKHEQMSQGANKNDVAPEFPASTFSTLGPRYAQQNPHQRSCTEDLVPIHAQWNDYEEGSYSGKQGGKSIIGCNGNEETMHSYIIFEGLLSNQTVEEDKIAPEKVSLEGATGYEREHERFQDRTTSAIGGGGGEREGERTVSLSMSSRVNSHSFFNRSHTGPDANDVSLELTLS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02123 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 132 IPR017930 -
Phac6g02123 302 FunFam Myb family transcription factor 74 132 - -
Phac6g02123 302 Gene3D - 75 133 - -
Phac6g02123 302 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 50 164 IPR046955 GO:0003700
Phac6g02123 302 SUPERFAMILY Homeodomain-like 74 130 IPR009057 -
Phac6g02123 302 NCBIfam myb-like DNA-binding domain, SHAQKYF class 76 130 IPR006447 GO:0003677
Phac6g02123 302 MobiDBLite consensus disorder prediction 1 50 - -
Phac6g02123 302 Pfam Myb-like DNA-binding domain 78 128 IPR001005 -
Phac6g02123 302 MobiDBLite consensus disorder prediction 280 302 - -
Phac6g02123 302 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02123 Phac-Chr6 20979631 20982390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02123 67 133 G2-like Transcription Factor Family AT2G42660 79.104 2.27e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac6g02123 Myb_DNA-binding 1.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02123 - - pvu:PHAVU_006G149000g 550.821