Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02113 ATGGACTGGACTAGAGGCCACATGCTCGGCCGTGGTTCCACCGCGGCCGTCTACATCGCCGAGTCCCACCGATCCGGTCGAGTGTTTGCCGTCAAGTCGGCGGAGCTACACCGCTCGGAATTCCTCAAAAGGGAGGAGATGATTCTTTCCACTCTAAAGTGTCCTCATATTGTGGCCTACCAAGGTTTTGACACCACATTTGAGAACGGTGTTTACTGGTTCAACATGTTTATGGAATACGCGCCTCACGGGACGCTGGCGGAGCGCGGTGGTGGCATGGAAGAAGCGGTGGTGGGATCCTACACGCGCCAAATTCTGCAGGCGCTGCACTACCTCCACTCCAATGGGATAGTGCATTGCGACGTGAAGGGGCAGAATGTGTTGGTGACGGAGGAGGGGGTGAAAATTGCGGATTTGGGTTGTGCTCGAAGGGTGGGGGAGTTGTCAGCAATTGCCGGAACGCCGGCGTTCATGTCGCCGGAGGTGGCGCGTGGGGAGCAGCAGGGGTTCCCTGCTGACGTGTGGGCTCTGGGGTGCACGGTGCTGGAGATGATCACCGGGAAGCCTCCGTGGCACGGCGGCGGTGACCCAGCGGCGGTGGTTTACAGGATCGGATTCTCCGATGAGTTGCCGGAGATTCCTAGCGGTGTTTCCGAGCAGGGGAGGGACTTTTTGGGAAAGTGTTTGAAGAGGGACCCGAATGAGAGGTGGTCGGTGGAGGAGCTTCTTGGACACGACACTCCAACTGGTGTGTTGGAACGAGGATTTTGGGATTCCTTGGAGACAATTGAGCATGGAGCACGTGATTACCCCTCTCCTAGGGACAGAATTGGTAGGTTGTTTTCGGATGAACCAGTTTGGGTATGGAACAACGATGATGATAATGATGATGAGCAATGGGTGACGGTGAGGAGCAATGAGTTCCATGAAGGATTTTCCCTTCTCAAAACAGAAACTACTTTTAATATGGTTAGTGATGAGGAAACCGGTTTGAGGCAGAAACTGTGA 1008 0.5486 MDWTRGHMLGRGSTAAVYIAESHRSGRVFAVKSAELHRSEFLKREEMILSTLKCPHIVAYQGFDTTFENGVYWFNMFMEYAPHGTLAERGGGMEEAVVGSYTRQILQALHYLHSNGIVHCDVKGQNVLVTEEGVKIADLGCARRVGELSAIAGTPAFMSPEVARGEQQGFPADVWALGCTVLEMITGKPPWHGGGDPAAVVYRIGFSDELPEIPSGVSEQGRDFLGKCLKRDPNERWSVEELLGHDTPTGVLERGFWDSLETIEHGARDYPSPRDRIGRLFSDEPVWVWNNDDDNDDEQWVTVRSNEFHEGFSLLKTETTFNMVSDEETGLRQKL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02113 335 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 309 - -
Phac6g02113 335 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Phac6g02113 335 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02113 335 Pfam Protein kinase domain 5 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02113 335 SUPERFAMILY Protein kinase-like (PK-like) 2 258 IPR011009 -
Phac6g02113 335 Gene3D Transferase(Phosphotransferase) domain 1 2 263 - -
Phac6g02113 335 CDD STKc_MAPKKK 2 245 - -
Phac6g02113 335 ProSiteProfiles Protein kinase domain profile. 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02113 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02113 Phac-Chr6 20911535 20912679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02113 1 280 MAP Kinase Kinase Kinase AT2G32510 48.765 2.94e-102 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac6g02113 Pkinase 2.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02113 K20716 - gmx:100802174 530.02