Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02111 ATGGACAAAGGATGGGGACTCACCCTTGATACCTCTTCCTCCCAATCTCTCTCATTATTTCCTTCCAAACAACCTTCCACTTCTTTCTCCAAACTTACCAGCGACACCATGTTCCCTCTCCTCGGATTCCCCGTCAACCTTAGCCGTCCTTCTGTCAAGGACGACGAACACAACCGCAAAGTCGTCGGTGAAGTCGACTTCTTCTCTGATAGAATCACCAAACCAACATCCCCACCCTCCCACGACCAACACGTTAAACCCAACATCGTCAAGAAGGAAATTCTTGAAACACCTCTCCACGTTAATACTGGTTTACAGCTCCTTACTGCTAACACTGGGAGCGATCAATCTACCGTCGATGATGGGGTTTCATCGGATGCAGAAGATAAGCTAGCCAAAACCACCGAGCTTGCACAGATGCAAGTGGAGCTTCAACGCATGAACGCAGAGAACAAGAAGTTGAAAGAGATGCTAAGCCATGTGACCGGTAACTACACCGCCTTGCAGATGCATCTTATGACATTAATGCATCAGAACCAGCGCACGGAGAACACAGAAAATGAGGTTGTTCAGGGAAAGGCCGGGGATAAAAATTATGCTGTCGGTGGAGGAAAGATTCCAAGGCAGTTCCTTGATATAGGTCCCAGCGGCGCAGCCGAAGTAGATGATCAAGTGTCTGATTCTTCTTCGGATGAGAGAACACGATCGAGCACACCTCAGAACAATAATAATGAAGTGGGAACAAGAGATGGTGCGAAAAATGTTAATGGAAAAAGAGAGTTGGGAAGGGAAGGGAGTCCAGATTCAGAATCACAAGGTTGGGCTCCTAATAAGCTTCAGAAAGTTAGCCCCTCCAATGCAATCGACCAGTCCACTACAGAAGCCACAATGAGAAAAGCTCGTGTCTCAGTTCGAGCCCGATCAGAAGCTCCCATGATAAGCGATGGGTGCCAATGGCGAAAATATGGACAAAAAATGGCCAAGGGGAACCCATGTCCTCGAGCATATTATAGATGCACCATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCCGAGGATAGAACAATTTTGGTAACAACATATGAAGGTACACATAATCATCCACTGCCACCTGCTGCTATGGCCATGGCGTCAACCACTTCAGCCGCTGCTAGCATGTTGCTGTCAGGGTCAATGTCCAGCGCAGATGGAATAATGAACCCAAATCTGCTAGCCAGAGCAATTCTTCCATGCAATTCTAGCATGGCAACACTTTCAGCTTCAGCACCATTCCCAACTGTGACTTTGGACCTCACACACAACCCAAACCCACTACAATTTCAGAGACCTTCTACCCCATTCCAAGTGCCCTTCCTCCAAGGGCAGCCTCAGAACTTTGGGTCCGGAGCCACCCCAATTGCACAAGCACAAGCACTTTATAATCAATCAAAATTCTCTGGTCTTCAGCTATCTCAGGAAGTAGGTTCTTCCCAGTTGACCGCACAAGCTACTAGACCACCCTTACAGCCTAGCCAGCAACCCTCGTCGGCTGATACAGTCAGTGCCGCGGCAGCCGCTATCACCTCCGATCCAAACTTCACCGCCGTCCTCGCCGCCGCAATATCCTCTATCATAGGCGGTGCTCATAATGCAAACAACAACACCAATAACAACAACAGCACAAGCAGGACTACCATTAGCAGCTTTTCAGGAAACTGA 1710 0.4848 MDKGWGLTLDTSSSQSLSLFPSKQPSTSFSKLTSDTMFPLLGFPVNLSRPSVKDDEHNRKVVGEVDFFSDRITKPTSPPSHDQHVKPNIVKKEILETPLHVNTGLQLLTANTGSDQSTVDDGVSSDAEDKLAKTTELAQMQVELQRMNAENKKLKEMLSHVTGNYTALQMHLMTLMHQNQRTENTENEVVQGKAGDKNYAVGGGKIPRQFLDIGPSGAAEVDDQVSDSSSDERTRSSTPQNNNNEVGTRDGAKNVNGKRELGREGSPDSESQGWAPNKLQKVSPSNAIDQSTTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMNPNLLARAILPCNSSMATLSASAPFPTVTLDLTHNPNPLQFQRPSTPFQVPFLQGQPQNFGSGATPIAQAQALYNQSKFSGLQLSQEVGSSQLTAQATRPPLQPSQQPSSADTVSAAAAAITSDPNFTAVLAAAISSIIGGAHNANNNTNNNNSTSRTTISSFSGN* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02111 569 MobiDBLite consensus disorder prediction 494 514 - -
Phac6g02111 569 ProSiteProfiles WRKY domain profile. 308 374 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g02111 569 Gene3D WRKY domain 298 375 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g02111 569 SMART WRKY_cls 313 373 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g02111 569 MobiDBLite consensus disorder prediction 270 297 - -
Phac6g02111 569 MobiDBLite consensus disorder prediction 546 569 - -
Phac6g02111 569 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 107 558 IPR044810 GO:0003700
Phac6g02111 569 Coils Coil 130 164 - -
Phac6g02111 569 Pfam WRKY DNA -binding domain 315 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g02111 569 SUPERFAMILY WRKY DNA-binding domain 306 374 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g02111 569 MobiDBLite consensus disorder prediction 252 266 - -
Phac6g02111 569 MobiDBLite consensus disorder prediction 210 297 - -
Phac6g02111 569 FunFam probable WRKY transcription factor 31 298 375 - -
Phac6g02111 569 MobiDBLite consensus disorder prediction 1 25 - -
Phac6g02111 569 MobiDBLite consensus disorder prediction 231 250 - -
Phac6g02111 569 MobiDBLite consensus disorder prediction 7 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02111 Phac-Chr6 20889026 20891733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02111 1 556 WRKY Transcription Factor Family AT1G62300 50.912 8.28e-159 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac6g02111 WRKY 6.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02111 - - pvu:PHAVU_006G147800g 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02111 6 20889026 20891733 Phac6g02111 6 20889026 20891733 ECH
Phac11g01473 11 12087682 12090973 Phac6g02111 6 20889026 20891733 ECH